RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SMIM4Q8WVI0 70 aa10.63□□□□□ -0.71
RPS28-201ENST00000417088 PRR13Q9NZ81 148 aa10.63□□□□□ -0.71
RPS28-201ENST00000417088 HLA-DRB4X5D2U9 266 aa10.63□□□□□ -0.71
RPS28-201ENST00000417088 PKHD1P08F94 4074 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 RGS5O15539 181 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 IFNA10P01566 189 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 AKAIN1P0CW23 69 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 SULT1A3P0DMM9 295 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 SULT1A4P0DMN0 295 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 NKX2-1P43699 371 aaPredicted RBP10.62□□□□□ -0.71
RPS28-201ENST00000417088 DEFB1P60022 68 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 ZNF705AQ6ZN79 300 aaPredicted RBP10.62□□□□□ -0.71
RPS28-201ENST00000417088 POM121L12Q8N7R1 296 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 IL22RA2Q969J5 263 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 NEU1Q99519 415 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 CACFD1Q9UGQ2 172 aa10.62□□□□□ -0.71
RPS28-201ENST00000417088 A0A1B0GVY2 172 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 ZNF705FA8MVS1 300 aaPredicted RBP10.61□□□□□ -0.71
RPS28-201ENST00000417088 CTDSPLO15194 276 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 ZNF705DP0CH99 300 aaPredicted RBP10.61□□□□□ -0.71
RPS28-201ENST00000417088 ZNF705BP0CI00 300 aaPredicted RBP10.61□□□□□ -0.71
RPS28-201ENST00000417088 P0DMU3 169 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 FAM231AP0DMU4 169 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 FAM231CP0DMU5 169 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 KLF9Q13886 244 aaPredicted RBP10.61□□□□□ -0.71
RPS28-201ENST00000417088 GDF5OSQ5U4N7 250 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 OR51S1Q8NGJ8 323 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 RNF125Q96EQ8 232 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 PRRT1Q99946 306 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 NDUFAF3Q9BU61 184 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 HSPB7Q9UBY9 170 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 KCNIP3Q9Y2W7 256 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 U3KQ87 197 aa10.61□□□□□ -0.71
RPS28-201ENST00000417088 DYNC1H1Q14204 4646 aaKnown RBP10.61□□□□□ -0.71
RPS28-201ENST00000417088 DNAH11Q96DT5 4516 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 RYR1P21817 5038 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 IGKV3-20P01619 116 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 CCR6P51684 374 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 FXYD7P58549 80 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 SPCS2Q15005 226 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 OR8G2PQ6IF36 304 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 CLVS1Q8IUQ0 354 aaPredicted RBP10.6□□□□□ -0.71
RPS28-201ENST00000417088 LGI3Q8N145 548 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 DTD1Q8TEA8 209 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 PBDC1Q9BVG4 233 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 WDR12Q9GZL7 423 aaKnown RBP10.6□□□□□ -0.71
RPS28-201ENST00000417088 RBKSQ9H477 322 aa10.6□□□□□ -0.71
RPS28-201ENST00000417088 IGKV1D-37A0A075B6S9 117 aa10.59□□□□□ -0.71
RPS28-201ENST00000417088 SMIM9A6NGZ8 99 aa10.59□□□□□ -0.71
RPS28-201ENST00000417088 SPART-AS1P0CW21 52 aa10.59□□□□□ -0.71
RPS28-201ENST00000417088 NUP62P37198 522 aaPredicted RBP10.59□□□□□ -0.71
RPS28-201ENST00000417088 EMP1P54849 157 aa10.59□□□□□ -0.71
RPS28-201ENST00000417088 ZNF90Q03938 601 aa10.59□□□□□ -0.71
RPS28-201ENST00000417088 IL18Q14116 193 aa10.59□□□□□ -0.71
RPS28-201ENST00000417088 GAMTQ14353 236 aa10.59□□□□□ -0.71
RPS28-201ENST00000417088 SMCO1Q147U7 214 aa10.59□□□□□ -0.71
RPS28-201ENST00000417088 LYZL2Q7Z4W2 148 aa10.59□□□□□ -0.71
RPS28-201ENST00000417088 LINC00052Q96N35 136 aa10.59□□□□□ -0.71
RPS28-201ENST00000417088 SAV1Q9H4B6 383 aaPredicted RBP10.59□□□□□ -0.71
RPS28-201ENST00000417088 A0A0B4J2A0 478 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 ANKRD20A5PA0PJZ0 165 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 TMEM189A5PLL7 270 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 ZFP92A6NM28 416 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 M0R2N4 97 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 SOCS3O14543 225 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 RTL8CO15255 209 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 SUPT4H1P63272 117 aaKnown RBP10.58□□□□□ -0.72
RPS28-201ENST00000417088 GSG1LQ6UXU4 331 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 FOXI2Q6ZQN5 318 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 DIRAS2Q96HU8 199 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 CLUHP3Q96NS8 147 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 SHPKQ9UHJ6 478 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 PFDN2Q9UHV9 154 aa10.58□□□□□ -0.72
RPS28-201ENST00000417088 IGHV3OR16-12A0A075B7B8 117 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 AKR1C4P17516 323 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 GPX4P36969 197 aaPredicted RBP10.57□□□□□ -0.72
RPS28-201ENST00000417088 ID1P41134 155 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 ALDH3B2P48448 385 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 PSMB3P49720 205 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 C1orf194Q5T5A4 169 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 ZNF709Q8N972 641 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 SLC35E1Q96K37 410 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 RABL2AQ9UBK7 228 aaPredicted RBP10.57□□□□□ -0.72
RPS28-201ENST00000417088 SCP2D1Q9UJQ7 156 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 RABL2BQ9UNT1 228 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 RFNGQ9Y644 331 aa10.57□□□□□ -0.72
RPS28-201ENST00000417088 PRSS29PA6NIE9 313 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 ATP5IP56385 69 aaPredicted RBP10.56□□□□□ -0.72
RPS28-201ENST00000417088 LYZP61626 148 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 ZNF79Q15937 498 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 LGALS9BQ3B8N2 356 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 GPR141Q7Z602 305 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 OR4B1Q8NGF8 309 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 COQ8AQ8NI60 647 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 SCGB3A2Q96PL1 93 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 SLC35B3Q9H1N7 401 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 DKK2Q9UBU2 259 aa10.56□□□□□ -0.72
RPS28-201ENST00000417088 SNRPGP15A8MWD9 76 aa10.55□□□□□ -0.72
RPS28-201ENST00000417088 F6UB75 175 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms