RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 IGLC2P0DOY2 106 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 IGLC3P0DOY3 106 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 PRRX1P54821 245 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 BSPH1Q075Z2 132 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 ALKBH7Q9BT30 221 aaPredicted RBP7.88□□□□□ -1.15
SS18-203ENST00000415083 PAXXQ9BUH6 204 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 GVINP1Q7Z2Y8 2422 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 SLC25A17O43808 307 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 APCSP02743 223 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 USF1P22415 310 aaPredicted RBP7.88□□□□□ -1.15
SS18-203ENST00000415083 ZNF137PP52743 207 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 LDLRAD2Q5SZI1 272 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 IGF2-ASQ6U949 168 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 LINC00173Q6ZV60 143 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 LINC00305Q7Z4B0 112 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 ZADH2Q8N4Q0 377 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 FLYWCH2Q96CP2 140 aaKnown RBP7.88□□□□□ -1.15
SS18-203ENST00000415083 TPRP12270 2363 aaKnown RBP7.88□□□□□ -1.15
SS18-203ENST00000415083 MT-ND6P03923 174 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 GP9P14770 177 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 HNRNPA3P51991 378 aaKnown RBP7.88□□□□□ -1.15
SS18-203ENST00000415083 C10orf113Q5VZT2 155 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 PRR27Q6MZM9 219 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 HCP5Q6MZN7 132 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 WDR73Q6P4I2 378 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 UNQ5815/PRO19632Q6UWF5 114 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 TCF24Q7RTU0 167 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 RNF2Q99496 336 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 PRSS22Q9GZN4 317 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 SAP30LQ9HAJ7 183 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 TNFRSF19Q9NS68 423 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 KLF12Q9Y4X4 402 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 APC2O95996 2303 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 FAM87AP0C7U9 286 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 KLF5Q13887 457 aaPredicted RBP7.87□□□□□ -1.15
SS18-203ENST00000415083 TBR1Q16650 682 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 ASCL2Q99929 193 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 COMMD5Q9GZQ3 224 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 C19orf71A6NCJ1 209 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 IGLV2-11P01706 119 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 HLA-DQA1P01909 254 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 TAS2R45P59539 299 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 RELQ04864 619 aaPredicted RBP7.87□□□□□ -1.15
SS18-203ENST00000415083 MEF2CQ06413 473 aaPredicted RBP7.87□□□□□ -1.15
SS18-203ENST00000415083 PMCHL1Q16048 86 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 Q56UQ5 140 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 LINC00311Q8N616 119 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 FAM57AQ8TBR7 257 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 ARHGAP32A7KAX9 2087 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 HIGD1CA8MV81 97 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 CAMPP49913 170 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 ATP5IP56385 69 aaPredicted RBP7.87□□□□□ -1.15
SS18-203ENST00000415083 GAGE1Q13065 139 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 FOXE3Q13461 319 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 OR4B1Q8NGF8 309 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 OR4C13Q8NGP0 309 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 GRAMD2BQ96HH9 432 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 LAMTOR2Q9Y2Q5 125 aa7.87□□□□□ -1.15
SS18-203ENST00000415083 TEX22C9J3V5 150 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 OR2J3O76001 311 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 Q8NA96 180 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 JKAMPQ9P055 326 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 ZFP30Q9Y2G7 519 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 CCL25O15444 150 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 COX7A2P2O60397 106 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 APOHP02749 345 aaPredicted RBP7.86□□□□□ -1.15
SS18-203ENST00000415083 TMEM155Q4W5P6 130 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 MRPL52Q86TS9 123 aaKnown RBP7.86□□□□□ -1.15
SS18-203ENST00000415083 PDPNQ86YL7 162 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 WFDC8Q8IUA0 241 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 BLNKQ8WV28 456 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 EPDR1Q9UM22 224 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 CBY1Q9Y3M2 126 aa7.86□□□□□ -1.15
SS18-203ENST00000415083 PTTG1IPP53801 180 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 SELENOVP59797 346 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 TMEM30BQ3MIR4 351 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 OR4F17Q8NGA8 305 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 OR8B3Q8NGG8 313 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 RNASE8Q8TDE3 154 aaKnown RBP7.85□□□□□ -1.15
SS18-203ENST00000415083 CCL17Q92583 94 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 BORCS7Q96B45 105 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 OR8B2Q96RD0 313 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 GAL3ST2Q9H3Q3 398 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 UQCR10Q9UDW1 63 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 TRAV8-1A0A0A6YYK1 113 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 FAM181BA6NEQ2 426 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 SHISA9B4DS77 424 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 ORM2P19652 201 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 ERHP84090 104 aaKnown RBP7.85□□□□□ -1.15
SS18-203ENST00000415083 BCL6BQ8N143 479 aaPredicted RBP7.85□□□□□ -1.15
SS18-203ENST00000415083 C8orf31Q8N9H6 132 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 H1FXQ92522 213 aaKnown RBP7.85□□□□□ -1.15
SS18-203ENST00000415083 RAB9BQ9NP90 201 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 CLEC5AQ9NY25 188 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 MRPL27Q9P0M9 148 aaKnown RBP7.85□□□□□ -1.15
SS18-203ENST00000415083 PPIAL4EA0A075B759 164 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 PPIAL4DF5H284 164 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 LTAP01374 205 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 APOA2P02652 100 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 LINC00614P0C842 121 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms