RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 RBMY1CP0DJD4 496 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 FAUP35544 74 aaKnown RBP10.33□□□□□ -0.76
NELFE-201ENST00000375425 GPX4P36969 197 aaPredicted RBP10.33□□□□□ -0.76
NELFE-201ENST00000375425 ATP5IP56385 69 aaPredicted RBP10.33□□□□□ -0.76
NELFE-201ENST00000375425 SNRPD3P62318 126 aaKnown RBP10.33□□□□□ -0.76
NELFE-201ENST00000375425 GAMTQ14353 236 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 RBMY1FQ15415 496 aaKnown RBP10.33□□□□□ -0.76
NELFE-201ENST00000375425 LGALS9CQ6DKI2 356 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 SIGLEC15Q6ZMC9 328 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 TMED4Q7Z7H5 227 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 TOMM5Q8N4H5 51 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 RPP25LQ8N5L8 163 aaKnown RBP10.33□□□□□ -0.76
NELFE-201ENST00000375425 CLEC5AQ9NY25 188 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 IGHV4-28A0A0C4DH34 117 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 ZFP92A6NM28 416 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 FAM90A26D6RGX4 464 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 PITX3O75364 302 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 MIFP14174 115 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 AP3S2P59780 193 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 TMEM128Q5BJH2 165 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 CSNK1G2-AS1Q8NCQ2 148 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 C2CD4CQ8TF44 421 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 TRIM63Q969Q1 353 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 RNF125Q96EQ8 232 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 SEPSECSQ9HD40 501 aaKnown RBP10.33□□□□□ -0.76
NELFE-201ENST00000375425 NRN1Q9NPD7 142 aa10.33□□□□□ -0.76
NELFE-201ENST00000375425 IGKV1D-37A0A075B6S9 117 aa10.32□□□□□ -0.76
NELFE-201ENST00000375425 PIGBOS1A0A0B4J2F0 54 aa10.32□□□□□ -0.76
NELFE-201ENST00000375425 ZNF705EA8MWA4 302 aaPredicted RBP10.32□□□□□ -0.76
NELFE-201ENST00000375425 DEDDO75618 318 aa10.32□□□□□ -0.76
NELFE-201ENST00000375425 ZNF90Q03938 601 aa10.32□□□□□ -0.76
NELFE-201ENST00000375425 PBDC1Q9BVG4 233 aa10.32□□□□□ -0.76
NELFE-201ENST00000375425 HRH4Q9H3N8 390 aa10.32□□□□□ -0.76
NELFE-201ENST00000375425 X6R8D5 127 aa10.32□□□□□ -0.76
NELFE-201ENST00000375425 DUXBA0A1W2PPF3 345 aa10.31□□□□□ -0.76
NELFE-201ENST00000375425 IAPPP10997 89 aa10.31□□□□□ -0.76
NELFE-201ENST00000375425 SLC35E1Q96K37 410 aa10.31□□□□□ -0.76
NELFE-201ENST00000375425 TBC1D24Q9ULP9 559 aa10.31□□□□□ -0.76
NELFE-201ENST00000375425 V9GYH0 126 aa10.31□□□□□ -0.76
NELFE-201ENST00000375425 ELOA3CA0A087WX78 387 aaPredicted RBP10.3□□□□□ -0.76
NELFE-201ENST00000375425 SNRPGP15A8MWD9 76 aa10.3□□□□□ -0.76
NELFE-201ENST00000375425 IGLL5B9A064 214 aa10.3□□□□□ -0.76
NELFE-201ENST00000375425 C11orf94C9JXX5 98 aa10.3□□□□□ -0.76
NELFE-201ENST00000375425 H3BMM0 161 aa10.3□□□□□ -0.76
NELFE-201ENST00000375425 VAMP1P23763 118 aa10.3□□□□□ -0.76
NELFE-201ENST00000375425 NUTF2P61970 127 aaKnown RBP10.3□□□□□ -0.76
NELFE-201ENST00000375425 RAB11AP62491 216 aa10.3□□□□□ -0.76
NELFE-201ENST00000375425 LRTM2Q8N967 370 aa10.3□□□□□ -0.76
NELFE-201ENST00000375425 SLC25A21Q9BQT8 299 aaPredicted RBP10.3□□□□□ -0.76
NELFE-201ENST00000375425 PFDN2Q9UHV9 154 aa10.3□□□□□ -0.76
NELFE-201ENST00000375425 PAIP2BQ9ULR5 123 aaKnown RBP10.3□□□□□ -0.76
NELFE-201ENST00000375425 CCDC160A6NGH7 325 aa10.29□□□□□ -0.76
NELFE-201ENST00000375425 SLC25A6P12236 298 aa10.29□□□□□ -0.76
NELFE-201ENST00000375425 HLA-DMBP28068 263 aa10.29□□□□□ -0.76
NELFE-201ENST00000375425 S100A5P33763 92 aa10.29□□□□□ -0.76
NELFE-201ENST00000375425 TCTAP57738 103 aa10.29□□□□□ -0.76
NELFE-201ENST00000375425 ZNF79Q15937 498 aa10.29□□□□□ -0.76
NELFE-201ENST00000375425 OR8G2PQ6IF36 304 aa10.29□□□□□ -0.76
NELFE-201ENST00000375425 XCL2Q9UBD3 114 aa10.29□□□□□ -0.76
NELFE-201ENST00000375425 MED6O75586 246 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 SFT2D2O95562 160 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 FABP1P07148 127 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 NUP62P37198 522 aaPredicted RBP10.28□□□□□ -0.76
NELFE-201ENST00000375425 NKX2-1P43699 371 aaPredicted RBP10.28□□□□□ -0.76
NELFE-201ENST00000375425 LYZP61626 148 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 PPP1R1AQ13522 171 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 OR2F1Q13607 317 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 CCDC190Q86UF4 302 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 DEDD2Q8WXF8 326 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 LINC00052Q96N35 136 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 C1QTNF4Q9BXJ3 329 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 WDR12Q9GZL7 423 aaKnown RBP10.28□□□□□ -0.76
NELFE-201ENST00000375425 TMED3Q9Y3Q3 217 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 HECTD4Q9Y4D8 3996 aa10.28□□□□□ -0.76
NELFE-201ENST00000375425 IGKV1OR2-108A0A075B7D4 117 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 HOXB5P09067 269 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 HLA-DRB4P13762 266 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 DEFB1P60022 68 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 PRR20EP86478 221 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 PRR20CP86479 221 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 PRR20DP86480 221 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 PRR20BP86481 221 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 PRR20AP86496 221 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 C1orf194Q5T5A4 169 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 Q6ZTC4 211 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 CENPSQ8N2Z9 138 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 TRGV9Q99603 122 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 MAGT1Q9H0U3 335 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 APLNQ9ULZ1 77 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 HLA-DRB4X5D2U9 266 aa10.27□□□□□ -0.77
NELFE-201ENST00000375425 WRBO00258 174 aa10.26□□□□□ -0.77
NELFE-201ENST00000375425 SYNGR2O43760 224 aa10.26□□□□□ -0.77
NELFE-201ENST00000375425 RPP30P78346 268 aaKnown RBP10.26□□□□□ -0.77
NELFE-201ENST00000375425 GDF5OSQ5U4N7 250 aa10.26□□□□□ -0.77
NELFE-201ENST00000375425 GSG1LQ6UXU4 331 aa10.26□□□□□ -0.77
NELFE-201ENST00000375425 PPP1R14BQ96C90 147 aa10.26□□□□□ -0.77
NELFE-201ENST00000375425 CIB3Q96Q77 187 aaPredicted RBP10.26□□□□□ -0.77
NELFE-201ENST00000375425 DNAH2Q9P225 4427 aa10.26□□□□□ -0.77
NELFE-201ENST00000375425 TRAV10A0A0B4J240 114 aa10.25□□□□□ -0.77
NELFE-201ENST00000375425 IGKV3-20P01619 116 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms