RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 LSM4Q9Y4Z0 139 aaKnown RBP12.91□□□□□ -0.34
NUCKS1-201ENST00000367142 VCYO14598 125 aa12.91□□□□□ -0.34
NUCKS1-201ENST00000367142 GATA3P23771 443 aa12.91□□□□□ -0.34
NUCKS1-201ENST00000367142 WDR83OSQ9Y284 106 aa12.91□□□□□ -0.34
NUCKS1-201ENST00000367142 BUB1B-PAK6H3BSN5 160 aa12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 SCRT1Q9BWW7 348 aa12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 DEFB130BP0DP73 79 aa12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 DEFB130AP0DP74 79 aa12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 GZMBP10144 247 aa12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 LEPROTO15243 131 aa12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 LCN12Q6JVE5 192 aa12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 ZNF474Q6S9Z5 364 aaPredicted RBP12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 IGKV1-9A0A0C4DH69 117 aa12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 FOXL1Q12952 345 aa12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 TRIP12Q14669 1992 aaPredicted RBP12.9□□□□□ -0.34
NUCKS1-201ENST00000367142 TRAV9-2A0A087WT02 112 aa12.9□□□□□ -0.35
NUCKS1-201ENST00000367142 CRYGSP22914 178 aa12.9□□□□□ -0.35
NUCKS1-201ENST00000367142 Q5PR19 223 aa12.9□□□□□ -0.35
NUCKS1-201ENST00000367142 NR2C2APQ86WQ0 139 aa12.9□□□□□ -0.35
NUCKS1-201ENST00000367142 FGFBP3Q8TAT2 258 aa12.9□□□□□ -0.35
NUCKS1-201ENST00000367142 C10orf55Q5SWW7 151 aa12.89□□□□□ -0.35
NUCKS1-201ENST00000367142 LHFPL4Q7Z7J7 247 aa12.89□□□□□ -0.35
NUCKS1-201ENST00000367142 ORAOV1Q8WV07 137 aa12.89□□□□□ -0.35
NUCKS1-201ENST00000367142 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
NUCKS1-201ENST00000367142 RNF223E7ERA6 249 aa12.89□□□□□ -0.35
NUCKS1-201ENST00000367142 GGNQ86UU5 652 aa12.89□□□□□ -0.35
NUCKS1-201ENST00000367142 NEUROG3Q9Y4Z2 214 aa12.89□□□□□ -0.35
NUCKS1-201ENST00000367142 ZNF329Q86UD4 541 aa12.89□□□□□ -0.35
NUCKS1-201ENST00000367142 RHPN1-AS1Q9BWJ2 59 aa12.89□□□□□ -0.35
NUCKS1-201ENST00000367142 RASL11AQ6T310 242 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 TREML4Q6UXN2 200 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 OCC1Q8TAD7 63 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 RNF222A6NCQ9 220 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 AMBPP02760 352 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 KLF12Q9Y4X4 402 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 SHISA3A0PJX4 238 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 PSPNO60542 156 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 DAD1P61803 113 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 EXOC3-AS1Q8N2X6 119 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 LAMTOR2Q9Y2Q5 125 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 MSRB2Q9Y3D2 182 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 H0YJW9 148 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 HIST1H4AP62805 103 aaKnown RBP12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 CD177Q8N6Q3 437 aa12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 MCRIP2Q9BUT9 160 aaKnown RBP12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 DAZ1Q9NQZ3 744 aaKnown RBP12.88□□□□□ -0.35
NUCKS1-201ENST00000367142 TMEM249Q2WGJ8 235 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 LINC00518Q8N0U6 118 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 EDA2RQ9HAV5 297 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 ATAD5Q96QE3 1844 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 TMEM155Q4W5P6 130 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 BPESC1Q9GZL8 116 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 FNDC4Q9H6D8 234 aaPredicted RBP12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 LINC01619G3V211 115 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 ITGB1BP1O14713 200 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 SH2D1AO60880 128 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 ZNF562Q6V9R5 426 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 MYMXA0A1B0GTQ4 84 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 ID3Q02535 119 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 HSD52Q0P140 79 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 FLVCR1-AS1Q8TAF5 88 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 ZNF479Q96JC4 524 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 CGB3P0DN86 165 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 HOXD3P31249 432 aaPredicted RBP12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 LYZL1Q6UWQ5 148 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 KNL1Q8NG31 2342 aa12.87□□□□□ -0.35
NUCKS1-201ENST00000367142 MBD3L4A6NDZ8 208 aaPredicted RBP12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 MBD3L3A6NE82 208 aaPredicted RBP12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 MBD3L5A6NJ08 208 aaPredicted RBP12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 NCR2O95944 276 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 SELLP14151 372 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 MBD3L2Q8NHZ7 208 aaPredicted RBP12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 D6R8Y8 96 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 COL11A2P13942 1736 aaPredicted RBP12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 DOCK5Q9H7D0 1870 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 DNAJC30Q96LL9 226 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 F5H768 121 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 CSRP3P50461 194 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 SUPT4H1P63272 117 aaKnown RBP12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 MSMBP08118 114 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 RMI2Q96E14 147 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 CSTL1Q9H114 145 aa12.86□□□□□ -0.35
NUCKS1-201ENST00000367142 PRB4P10163 310 aaPredicted RBP12.85□□□□□ -0.35
NUCKS1-201ENST00000367142 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
NUCKS1-201ENST00000367142 FAM90A2PQ658T7 463 aa12.85□□□□□ -0.35
NUCKS1-201ENST00000367142 C1QL4Q86Z23 238 aa12.85□□□□□ -0.35
NUCKS1-201ENST00000367142 TRAV13-1A0A0B4J241 112 aa12.85□□□□□ -0.35
NUCKS1-201ENST00000367142 TCRAP04437 139 aa12.85□□□□□ -0.35
NUCKS1-201ENST00000367142 GATA4P43694 442 aa12.85□□□□□ -0.35
NUCKS1-201ENST00000367142 PSG3Q16557 428 aa12.85□□□□□ -0.35
NUCKS1-201ENST00000367142 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
NUCKS1-201ENST00000367142 COL8A2P25067 703 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 Q96MF0 132 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 GGTLC1Q9BX51 225 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 RFNGQ9Y644 331 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms