RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SEPSECSQ9HD40 501 aaKnown RBP9.96□□□□□ -0.82
TNFRSF1A-202ENST00000366159 HELTA6NFD8 242 aa9.95□□□□□ -0.82
TNFRSF1A-202ENST00000366159 FAM90A26D6RGX4 464 aa9.95□□□□□ -0.82
TNFRSF1A-202ENST00000366159 AP2S1P53680 142 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-202ENST00000366159 TMED4Q7Z7H5 227 aa9.95□□□□□ -0.82
TNFRSF1A-202ENST00000366159 STHQ8IWL8 128 aa9.95□□□□□ -0.82
TNFRSF1A-202ENST00000366159 CSNK1G2-AS1Q8NCQ2 148 aa9.95□□□□□ -0.82
TNFRSF1A-202ENST00000366159 PHLDA1Q8WV24 401 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-202ENST00000366159 KNCNA6PVL3 124 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 SFT2D2O95562 160 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 SPP1P10451 314 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 C4BPBP20851 252 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 S100A5P33763 92 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 DHRS2Q13268 280 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 TMEM41BQ5BJD5 291 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 MORN3Q6PF18 240 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 Q8NAQ8 132 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 OR51G1Q8NGK1 321 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 OR1S1Q8NH92 325 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 RAB40CQ96S21 281 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 SRRQ9GZT4 340 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 DNAH10Q8IVF4 4471 aa9.94□□□□□ -0.82
TNFRSF1A-202ENST00000366159 ZNF705EA8MWA4 302 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-202ENST00000366159 PRSS46E5RG02 174 aa9.93□□□□□ -0.82
TNFRSF1A-202ENST00000366159 IFNA4P05014 189 aa9.93□□□□□ -0.82
TNFRSF1A-202ENST00000366159 EIF2B2P49770 351 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-202ENST00000366159 ZNF90Q03938 601 aa9.93□□□□□ -0.82
TNFRSF1A-202ENST00000366159 PPP1R1AQ13522 171 aa9.93□□□□□ -0.82
TNFRSF1A-202ENST00000366159 RNF125Q96EQ8 232 aa9.93□□□□□ -0.82
TNFRSF1A-202ENST00000366159 NRN1Q9NPD7 142 aa9.93□□□□□ -0.82
TNFRSF1A-202ENST00000366159 KLK5Q9Y337 293 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-202ENST00000366159 TMED3Q9Y3Q3 217 aa9.93□□□□□ -0.82
TNFRSF1A-202ENST00000366159 IGKV1OR2-108A0A075B7D4 117 aa9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 RBMY1A1P0DJD3 496 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 RBMY1CP0DJD4 496 aa9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 VAMP1P23763 118 aa9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 NANOS2P60321 138 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 RBMY1FQ15415 496 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 BAK1Q16611 211 aa9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 OR8G2PQ6IF36 304 aa9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 SIGLEC15Q6ZMC9 328 aa9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 C11orf45Q8TAV5 145 aa9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 X6R8D5 127 aa9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 DNAH6Q9C0G6 4158 aa9.92□□□□□ -0.82
TNFRSF1A-202ENST00000366159 CCDC160A6NGH7 325 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 DEFB4AO15263 64 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 LY6G6CO95867 125 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 IAPPP10997 89 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 UBE2MP61081 183 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 PSMG4Q5JS54 123 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 ACTL10Q5JWF8 245 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 CENPSQ8N2Z9 138 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 THAP8Q8NA92 274 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 TRGV9Q99603 122 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 SDHCQ99643 169 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 MFFQ9GZY8 342 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 HRH4Q9H3N8 390 aa9.91□□□□□ -0.82
TNFRSF1A-202ENST00000366159 ZFP92A6NM28 416 aa9.9□□□□□ -0.82
TNFRSF1A-202ENST00000366159 H3BMM0 161 aa9.9□□□□□ -0.82
TNFRSF1A-202ENST00000366159 SYNGR2O43760 224 aa9.9□□□□□ -0.82
TNFRSF1A-202ENST00000366159 ID3Q02535 119 aa9.9□□□□□ -0.82
TNFRSF1A-202ENST00000366159 SPANXN2Q5MJ10 180 aa9.9□□□□□ -0.82
TNFRSF1A-202ENST00000366159 C1orf194Q5T5A4 169 aa9.9□□□□□ -0.82
TNFRSF1A-202ENST00000366159 GGNBP1Q5YKI7 109 aa9.9□□□□□ -0.82
TNFRSF1A-202ENST00000366159 SLC35E1Q96K37 410 aa9.9□□□□□ -0.82
TNFRSF1A-202ENST00000366159 IGHV4-28A0A0C4DH34 117 aa9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 C9orf170A2RU37 121 aa9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 NAP1L6A6NFF2 107 aa9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 SOCS3O14543 225 aa9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 MED6O75586 246 aa9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 NDUFB6O95139 128 aa9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 HOXB5P09067 269 aa9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 MIFP14174 115 aa9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 NUP62P37198 522 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 NKX2-1P43699 371 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 SNRPD3P62318 126 aaKnown RBP9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 RAB11AP62491 216 aa9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 LGALS9CQ6DKI2 356 aa9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 CIB3Q96Q77 187 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 WDR12Q9GZL7 423 aaKnown RBP9.89□□□□□ -0.83
TNFRSF1A-202ENST00000366159 ELOA3CA0A087WX78 387 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF1A-202ENST00000366159 SNRPGP15A8MWD9 76 aa9.88□□□□□ -0.83
TNFRSF1A-202ENST00000366159 BTCP35070 178 aa9.88□□□□□ -0.83
TNFRSF1A-202ENST00000366159 C17orf77Q96MU5 243 aa9.88□□□□□ -0.83
TNFRSF1A-202ENST00000366159 PBDC1Q9BVG4 233 aa9.88□□□□□ -0.83
TNFRSF1A-202ENST00000366159 MAGT1Q9H0U3 335 aa9.88□□□□□ -0.83
TNFRSF1A-202ENST00000366159 CLEC5AQ9NY25 188 aa9.88□□□□□ -0.83
TNFRSF1A-202ENST00000366159 WRBO00258 174 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 ADAP1O75689 374 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 FABP1P07148 127 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 HLA-DRB4P13762 266 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 RPP30P78346 268 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 GDF5OSQ5U4N7 250 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 TMEM182Q6ZP80 229 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 OR4D5Q8NGN0 318 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 CLUHP3Q96NS8 147 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 FBXL17Q9UF56 701 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 PFDN2Q9UHV9 154 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 TBC1D24Q9ULP9 559 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 FLVCR2Q9UPI3 526 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms