RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 EDN2P20800 178 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 CEACAM3P40198 252 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 DEFB1P60022 68 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 C11orf44Q8N8P7 122 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 TEX45Q8NA69 505 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 OR2T10Q8NGZ9 312 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 F11RQ9Y624 299 aaKnown RBP10.92□□□□□ -0.66
LSS-201ENST00000356396 FAM90A9PA6NNJ1 464 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 TRBV12-3P01733 135 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 IL4P05112 153 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 EGR2P11161 476 aaPredicted RBP10.92□□□□□ -0.66
LSS-201ENST00000356396 RPL23P62829 140 aaKnown RBP10.92□□□□□ -0.66
LSS-201ENST00000356396 RAB31Q13636 194 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 BSXQ3C1V8 233 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 C16orf82Q7Z2V1 217 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 FANCD2OSQ96PS1 177 aa10.92□□□□□ -0.66
LSS-201ENST00000356396 RNASE7Q9H1E1 156 aaKnown RBP10.92□□□□□ -0.66
LSS-201ENST00000356396 A0A1B0GUS0 222 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 M0R1W7 72 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 MGST1P10620 155 aaKnown RBP10.91□□□□□ -0.66
LSS-201ENST00000356396 HLA-DMBP28068 263 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 C10orf113Q5VZT2 155 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 Q96MF0 132 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 SMR3AQ99954 134 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 SLC25A2Q9BXI2 301 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 ATRQ13535 2644 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 PIGBOS1A0A0B4J2F0 54 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 IGKV1-17P01599 117 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 IGHV4-59P01825 116 aa10.91□□□□□ -0.66
LSS-201ENST00000356396 M0R3E3 92 aa10.9□□□□□ -0.66
LSS-201ENST00000356396 FCGR2BP31994 310 aaPredicted RBP10.9□□□□□ -0.66
LSS-201ENST00000356396 RHOBP62745 196 aa10.9□□□□□ -0.66
LSS-201ENST00000356396 CENPVQ7Z7K6 275 aaPredicted RBP10.9□□□□□ -0.66
LSS-201ENST00000356396 KLK15Q9H2R5 256 aa10.9□□□□□ -0.66
LSS-201ENST00000356396 DNAJC4Q9NNZ3 241 aa10.9□□□□□ -0.66
LSS-201ENST00000356396 BEX4Q9NWD9 120 aaPredicted RBP10.9□□□□□ -0.66
LSS-201ENST00000356396 FUT9Q9Y231 359 aa10.9□□□□□ -0.66
LSS-201ENST00000356396 RPL29P47914 159 aaKnown RBP10.9□□□□□ -0.66
LSS-201ENST00000356396 SNRPEP62304 92 aaKnown RBP10.9□□□□□ -0.66
LSS-201ENST00000356396 CLEC19AQ6UXS0 136 aa10.9□□□□□ -0.66
LSS-201ENST00000356396 OCC1Q8TAD7 63 aa10.9□□□□□ -0.66
LSS-201ENST00000356396 AMY1AP04745 511 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 MSMBP08118 114 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 UBE2E1P51965 193 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 PQLC2Q6ZP29 291 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 PIFOQ8TCI5 191 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 RASL11BQ9BPW5 248 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 SDF2L1Q9HCN8 221 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 TIMM9Q9Y5J7 89 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 NBEAL2Q6ZNJ1 2754 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 USF2Q15853 346 aaPredicted RBP10.89□□□□□ -0.67
LSS-201ENST00000356396 Q5PR19 223 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 RBMS3Q6XE24 437 aaKnown RBP10.89□□□□□ -0.67
LSS-201ENST00000356396 FAM167A-AS1Q96KT0 104 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 TCRBV4S1A1TA0A5B7 111 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 I3L2K1 104 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 K7EN84 100 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 GNG7O60262 68 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 TRGC2P03986 189 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 SUB1P53999 127 aaKnown RBP eCLIP10.89□□□□□ -0.672e-6■■■□□ 15
LSS-201ENST00000356396 C15orf32Q32M92 178 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 GFI1BQ5VTD9 330 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 SMCO4Q9NRQ5 59 aa10.89□□□□□ -0.67
LSS-201ENST00000356396 MUC21A0A0G2JKD1 596 aa10.88□□□□□ -0.67
LSS-201ENST00000356396 MUC21A0A140T8X8 626 aa10.88□□□□□ -0.67
LSS-201ENST00000356396 IGLC1P0CG04 106 aa10.88□□□□□ -0.67
LSS-201ENST00000356396 SRD5A1P18405 259 aa10.88□□□□□ -0.67
LSS-201ENST00000356396 MUC21Q5SSG8 566 aa10.88□□□□□ -0.67
LSS-201ENST00000356396 FBXL7Q9UJT9 491 aa10.88□□□□□ -0.67
LSS-201ENST00000356396 CXorf1O96002 111 aa10.88□□□□□ -0.67
LSS-201ENST00000356396 APOHP02749 345 aaPredicted RBP10.88□□□□□ -0.67
LSS-201ENST00000356396 CLEC3BP05452 202 aa10.88□□□□□ -0.67
LSS-201ENST00000356396 TMEM241Q24JQ0 296 aa10.88□□□□□ -0.67
LSS-201ENST00000356396 TRRAPQ9Y4A5 3859 aa10.88□□□□□ -0.67
LSS-201ENST00000356396 CR1P17927 2039 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 MBP02144 154 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 ELOBQ15370 118 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 DEFB112Q30KQ8 113 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 TRAV1-1A0A0B4J248 108 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 IGHV1-69DA0A0B4J2H0 117 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 IGHV1-69P01742 117 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 FAM106CPP0CH98 169 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 RD3LP0DJH9 198 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 TMEM30BQ3MIR4 351 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 C8orf31Q8N9H6 132 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 OR1P1Q8NH06 330 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 PAXXQ9BUH6 204 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 SERTAD4Q9NUC0 356 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 AGRNO00468 2067 aa10.87□□□□□ -0.67
LSS-201ENST00000356396 PSMB11A5LHX3 300 aa10.86□□□□□ -0.67
LSS-201ENST00000356396 PGPA6NDG6 321 aa10.86□□□□□ -0.67
LSS-201ENST00000356396 NUDT19A8MXV4 375 aa10.86□□□□□ -0.67
LSS-201ENST00000356396 IFNA1P01562 189 aa10.86□□□□□ -0.67
LSS-201ENST00000356396 RHOGP84095 191 aa10.86□□□□□ -0.67
LSS-201ENST00000356396 BTBD17A6NE02 478 aa10.86□□□□□ -0.67
LSS-201ENST00000356396 SEC14L6B5MCN3 397 aa10.86□□□□□ -0.67
LSS-201ENST00000356396 F8W735 103 aaPredicted RBP10.86□□□□□ -0.67
LSS-201ENST00000356396 CORTO00230 105 aa10.86□□□□□ -0.67
LSS-201ENST00000356396 ZNF705DP0CH99 300 aaPredicted RBP10.86□□□□□ -0.67
LSS-201ENST00000356396 ZNF705BP0CI00 300 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms