RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 OR51G1Q8NGK1 321 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 DIRAS2Q96HU8 199 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 RNF126Q9BV68 326 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 C1QTNF4Q9BXJ3 329 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 XCL2Q9UBD3 114 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 ALDH3B2P48448 385 aa10.4□□□□□ -0.74
PRPF40A-201ENST00000354363 NUTF2P61970 127 aaKnown RBP10.4□□□□□ -0.74
PRPF40A-201ENST00000354363 ZNF767PQ75MW2 155 aa10.4□□□□□ -0.74
PRPF40A-201ENST00000354363 MRPS26Q9BYN8 205 aaKnown RBP10.4□□□□□ -0.74
PRPF40A-201ENST00000354363 RABL2AQ9UBK7 228 aaPredicted RBP10.4□□□□□ -0.74
PRPF40A-201ENST00000354363 HSPB7Q9UBY9 170 aa10.4□□□□□ -0.74
PRPF40A-201ENST00000354363 RABL2BQ9UNT1 228 aa10.4□□□□□ -0.74
PRPF40A-201ENST00000354363 KCNIP3Q9Y2W7 256 aa10.4□□□□□ -0.74
PRPF40A-201ENST00000354363 U3KQ87 197 aa10.4□□□□□ -0.74
PRPF40A-201ENST00000354363 ANKRD20A5PA0PJZ0 165 aa10.4□□□□□ -0.75
PRPF40A-201ENST00000354363 HLA-DRB4P13762 266 aa10.4□□□□□ -0.75
PRPF40A-201ENST00000354363 CCR6P51684 374 aa10.4□□□□□ -0.75
PRPF40A-201ENST00000354363 SMCO1Q147U7 214 aa10.4□□□□□ -0.75
PRPF40A-201ENST00000354363 DTD1Q8TEA8 209 aa10.4□□□□□ -0.75
PRPF40A-201ENST00000354363 RNF125Q96EQ8 232 aa10.4□□□□□ -0.75
PRPF40A-201ENST00000354363 RBKSQ9H477 322 aa10.4□□□□□ -0.75
PRPF40A-201ENST00000354363 HLA-DRB4X5D2U9 266 aa10.4□□□□□ -0.75
PRPF40A-201ENST00000354363 DNAH17Q9UFH2 4485 aa10.39□□□□□ -0.75
PRPF40A-201ENST00000354363 DEFB131BA0A096LNP1 70 aa10.39□□□□□ -0.75
PRPF40A-201ENST00000354363 A0A0B4J2A0 478 aa10.39□□□□□ -0.75
PRPF40A-201ENST00000354363 AMBPP02760 352 aa10.39□□□□□ -0.75
PRPF40A-201ENST00000354363 NKX2-1P43699 371 aaPredicted RBP10.39□□□□□ -0.75
PRPF40A-201ENST00000354363 KLF9Q13886 244 aaPredicted RBP10.39□□□□□ -0.75
PRPF40A-201ENST00000354363 LYZL2Q7Z4W2 148 aa10.39□□□□□ -0.75
PRPF40A-201ENST00000354363 LGI3Q8N145 548 aa10.39□□□□□ -0.75
PRPF40A-201ENST00000354363 SHPKQ9UHJ6 478 aa10.39□□□□□ -0.75
PRPF40A-201ENST00000354363 SCP2D1Q9UJQ7 156 aa10.39□□□□□ -0.75
PRPF40A-201ENST00000354363 IGKV1D-37A0A075B6S9 117 aa10.38□□□□□ -0.75
PRPF40A-201ENST00000354363 NUP62P37198 522 aaPredicted RBP10.38□□□□□ -0.75
PRPF40A-201ENST00000354363 DEFB1P60022 68 aa10.38□□□□□ -0.75
PRPF40A-201ENST00000354363 SUPT4H1P63272 117 aaKnown RBP10.38□□□□□ -0.75
PRPF40A-201ENST00000354363 GDF5OSQ5U4N7 250 aa10.38□□□□□ -0.75
PRPF40A-201ENST00000354363 DYNC2LI1Q8TCX1 351 aa10.38□□□□□ -0.75
PRPF40A-201ENST00000354363 SCGB3A2Q96PL1 93 aa10.38□□□□□ -0.75
PRPF40A-201ENST00000354363 PBDC1Q9BVG4 233 aa10.38□□□□□ -0.75
PRPF40A-201ENST00000354363 CCDC59Q9P031 241 aaKnown RBP10.38□□□□□ -0.75
PRPF40A-201ENST00000354363 FAT2Q9NYQ8 4349 aa10.37□□□□□ -0.75
PRPF40A-201ENST00000354363 AKR1C4P17516 323 aa10.37□□□□□ -0.75
PRPF40A-201ENST00000354363 ZNF90Q03938 601 aa10.37□□□□□ -0.75
PRPF40A-201ENST00000354363 GAMTQ14353 236 aa10.37□□□□□ -0.75
PRPF40A-201ENST00000354363 OR8G2PQ6IF36 304 aa10.37□□□□□ -0.75
PRPF40A-201ENST00000354363 ZNF705AQ6ZN79 300 aaPredicted RBP10.37□□□□□ -0.75
PRPF40A-201ENST00000354363 NEU1Q99519 415 aa10.37□□□□□ -0.75
PRPF40A-201ENST00000354363 SCRT1Q9BWW7 348 aa10.37□□□□□ -0.75
PRPF40A-201ENST00000354363 DNAH2Q9P225 4427 aa10.37□□□□□ -0.75
PRPF40A-201ENST00000354363 ZFP92A6NM28 416 aa10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 GPX4P36969 197 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 FXYD7P58549 80 aa10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 SLC35E1Q96K37 410 aa10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 WDR12Q9GZL7 423 aaKnown RBP10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 MCUBQ9NWR8 336 aa10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 KIAA1109Q2LD37 5005 aa10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 ZNF705FA8MVS1 300 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 IGKV3-20P01619 116 aa10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 ZNF705DP0CH99 300 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 ZNF705BP0CI00 300 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 ATP5IP56385 69 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 OR1S1Q8NH92 325 aa10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 RAB2BQ8WUD1 216 aa10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 LINC00052Q96N35 136 aa10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 SAV1Q9H4B6 383 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 RSL24D1Q9UHA3 163 aaKnown RBP10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 PFDN2Q9UHV9 154 aa10.36□□□□□ -0.75
PRPF40A-201ENST00000354363 SOCS3O14543 225 aa10.35□□□□□ -0.75
PRPF40A-201ENST00000354363 ANXA3P12429 323 aa10.35□□□□□ -0.75
PRPF40A-201ENST00000354363 ID1P41134 155 aa10.35□□□□□ -0.75
PRPF40A-201ENST00000354363 LYZP61626 148 aa10.35□□□□□ -0.75
PRPF40A-201ENST00000354363 SRPXP78539 464 aa10.35□□□□□ -0.75
PRPF40A-201ENST00000354363 FOXI2Q6ZQN5 318 aa10.35□□□□□ -0.75
PRPF40A-201ENST00000354363 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
PRPF40A-201ENST00000354363 POM121L12Q8N7R1 296 aa10.35□□□□□ -0.75
PRPF40A-201ENST00000354363 SOSTQ9BQB4 213 aa10.35□□□□□ -0.75
PRPF40A-201ENST00000354363 NDUFAF3Q9BU61 184 aa10.35□□□□□ -0.75
PRPF40A-201ENST00000354363 SMIM9A6NGZ8 99 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 PITX3O75364 302 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 P0DMU3 169 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 FAM231AP0DMU4 169 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 FAM231CP0DMU5 169 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 PSMB3P49720 205 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 C1orf194Q5T5A4 169 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 GSG1LQ6UXU4 331 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 ZNF709Q8N972 641 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 CLUHP3Q96NS8 147 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 BCL7BQ9BQE9 202 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 PKHD1P08F94 4074 aa10.34□□□□□ -0.75
PRPF40A-201ENST00000354363 IGHV3OR16-12A0A075B7B8 117 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 TMEM189A5PLL7 270 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 FABP1P07148 127 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 SPART-AS1P0CW21 52 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 TNFSF8P32971 234 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 EMP1P54849 157 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 TMBIM6P55061 237 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 OR2F1Q13607 317 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 COQ8AQ8NI60 647 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 TRGV9Q99603 122 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms