RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 B2MP61769 119 aa20.82■□□□□ 0.92
SSBP4-202ENST00000348495 TEX261Q6UWH6 196 aa20.82■□□□□ 0.92
SSBP4-202ENST00000348495 KLHL30-AS1Q8NEE0 82 aa20.82■□□□□ 0.92
SSBP4-202ENST00000348495 SLC39A9Q9NUM3 307 aa20.82■□□□□ 0.92
SSBP4-202ENST00000348495 ADARB2-AS1A8MUL3 147 aa20.81■□□□□ 0.92
SSBP4-202ENST00000348495 YIF1AO95070 293 aa20.81■□□□□ 0.92
SSBP4-202ENST00000348495 TSPAN15O95858 294 aa20.81■□□□□ 0.92
SSBP4-202ENST00000348495 EIF5AL1Q6IS14 154 aaKnown RBP20.81■□□□□ 0.92
SSBP4-202ENST00000348495 ZNF600Q6ZNG1 722 aa20.81■□□□□ 0.92
SSBP4-202ENST00000348495 FBN1P35555 2871 aaKnown RBP20.81■□□□□ 0.92
SSBP4-202ENST00000348495 GGCTO75223 188 aaKnown RBP20.81■□□□□ 0.92
SSBP4-202ENST00000348495 OR2C1O95371 312 aa20.81■□□□□ 0.92
SSBP4-202ENST00000348495 IFITM2Q01629 132 aa20.81■□□□□ 0.92
SSBP4-202ENST00000348495 HSPB1P04792 205 aaKnown RBP20.8■□□□□ 0.92
SSBP4-202ENST00000348495 RELQ04864 619 aaPredicted RBP20.8■□□□□ 0.92
SSBP4-202ENST00000348495 FFAR4Q5NUL3 377 aa20.8■□□□□ 0.92
SSBP4-202ENST00000348495 ALKAL2Q6UX46 152 aa20.8■□□□□ 0.92
SSBP4-202ENST00000348495 OR51G1Q8NGK1 321 aa20.8■□□□□ 0.92
SSBP4-202ENST00000348495 Q8WTZ3 238 aa20.8■□□□□ 0.92
SSBP4-202ENST00000348495 IGHV4OR15-8A0A075B7B6 117 aa20.79■□□□□ 0.92
SSBP4-202ENST00000348495 A0A087WW49 117 aa20.79■□□□□ 0.92
SSBP4-202ENST00000348495 IGHV3-35A0A0C4DH35 117 aa20.79■□□□□ 0.92
SSBP4-202ENST00000348495 PLP1P60201 277 aa20.79■□□□□ 0.92
SSBP4-202ENST00000348495 PUS1Q9Y606 427 aaKnown RBP eCLIP20.79■□□□□ 0.92
SSBP4-202ENST00000348495 TENM1Q9UKZ4 2725 aa20.79■□□□□ 0.92
SSBP4-202ENST00000348495 WI2-2373I1.2A0A1W2PRP0 233 aa20.78■□□□□ 0.92
SSBP4-202ENST00000348495 ELLP55199 621 aaPredicted RBP20.78■□□□□ 0.92
SSBP4-202ENST00000348495 ZNF680Q8NEM1 530 aa20.78■□□□□ 0.92
SSBP4-202ENST00000348495 ZFAND3Q9H8U3 227 aa20.78■□□□□ 0.92
SSBP4-202ENST00000348495 NUDT19A8MXV4 375 aa20.78■□□□□ 0.92
SSBP4-202ENST00000348495 DEFB136Q30KP8 78 aa20.78■□□□□ 0.92
SSBP4-202ENST00000348495 GCSAMLQ5JQS6 135 aa20.78■□□□□ 0.92
SSBP4-202ENST00000348495 TOMM20LQ6UXN7 152 aa20.78■□□□□ 0.92
SSBP4-202ENST00000348495 C8orf86Q6ZUL3 223 aa20.78■□□□□ 0.92
SSBP4-202ENST00000348495 CITED1Q99966 193 aa20.78■□□□□ 0.92
SSBP4-202ENST00000348495 VSIRQ9H7M9 311 aa20.78■□□□□ 0.92
SSBP4-202ENST00000348495 A0A1W2PRX2 142 aa20.77■□□□□ 0.92
SSBP4-202ENST00000348495 Q6ZRG5 221 aa20.77■□□□□ 0.92
SSBP4-202ENST00000348495 NDUFA11Q86Y39 141 aa20.77■□□□□ 0.92
SSBP4-202ENST00000348495 TMEM158Q8WZ71 300 aa20.77■□□□□ 0.92
SSBP4-202ENST00000348495 IL4P05112 153 aa20.76■□□□□ 0.91
SSBP4-202ENST00000348495 RNF125Q96EQ8 232 aa20.76■□□□□ 0.91
SSBP4-202ENST00000348495 RCC1LQ96I51 464 aaKnown RBP20.76■□□□□ 0.91
SSBP4-202ENST00000348495 NDUFA4O00483 81 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 PXDC1Q5TGL8 231 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 GPHB5Q86YW7 130 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 OR11H1Q8NG94 326 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 OR1N2Q8NGR9 330 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 TMEM37Q8WXS4 190 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 UMAD1C9J7I0 102 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 RAB2AP61019 212 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 FAM74A1Q5RGS3 127 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 PATE2Q6UY27 113 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 RPRMQ9NS64 109 aa20.75■□□□□ 0.91
SSBP4-202ENST00000348495 MBP02144 154 aa20.74■□□□□ 0.91
SSBP4-202ENST00000348495 M6PRP20645 277 aa20.74■□□□□ 0.91
SSBP4-202ENST00000348495 HOXD3P31249 432 aaPredicted RBP20.74■□□□□ 0.91
SSBP4-202ENST00000348495 SULT1A2P50226 295 aa20.74■□□□□ 0.91
SSBP4-202ENST00000348495 LYZP61626 148 aa20.74■□□□□ 0.91
SSBP4-202ENST00000348495 USF2Q15853 346 aaPredicted RBP20.74■□□□□ 0.91
SSBP4-202ENST00000348495 ACOT6Q3I5F7 207 aaPredicted RBP20.74■□□□□ 0.91
SSBP4-202ENST00000348495 RAX2Q96IS3 184 aa20.74■□□□□ 0.91
SSBP4-202ENST00000348495 LINC01619G3V211 115 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 IFNA7P01567 189 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 ORM2P19652 201 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 ZP3P21754 424 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 FHL3Q13643 280 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 RPEL1Q2QD12 228 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 TMEM41BQ5BJD5 291 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 AKR1C8PQ5T2L2 129 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 UNQ9165/PRO28630Q6UXU0 137 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 MRPL27Q9P0M9 148 aaKnown RBP20.73■□□□□ 0.91
SSBP4-202ENST00000348495 DOK5Q9P104 306 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 RPP25LQ8N5L8 163 aaKnown RBP20.73■□□□□ 0.91
SSBP4-202ENST00000348495 OR1B1Q8NGR6 318 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 TMEM190Q8WZ59 177 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 DNAJC4Q9NNZ3 241 aa20.73■□□□□ 0.91
SSBP4-202ENST00000348495 HYPMO75409 117 aa20.72■□□□□ 0.91
SSBP4-202ENST00000348495 OR10G4Q8NGN3 311 aa20.72■□□□□ 0.91
SSBP4-202ENST00000348495 OR10G9Q8NGN4 311 aa20.72■□□□□ 0.91
SSBP4-202ENST00000348495 OR10G7Q8NGN6 311 aa20.72■□□□□ 0.91
SSBP4-202ENST00000348495 OR1L4Q8NGR5 311 aa20.72■□□□□ 0.91
SSBP4-202ENST00000348495 GATAD1Q8WUU5 269 aa20.72■□□□□ 0.91
SSBP4-202ENST00000348495 DUX3Q96PT4 197 aa20.72■□□□□ 0.91
SSBP4-202ENST00000348495 PFDN5Q99471 154 aa20.72■□□□□ 0.91
SSBP4-202ENST00000348495 PBDC1Q9BVG4 233 aa20.72■□□□□ 0.91
SSBP4-202ENST00000348495 IGHV3OR16-8A0A075B7F1 116 aa20.71■□□□□ 0.91
SSBP4-202ENST00000348495 ELOA3CA0A087WX78 387 aaPredicted RBP20.71■□□□□ 0.91
SSBP4-202ENST00000348495 RAB5CP51148 216 aa20.71■□□□□ 0.91
SSBP4-202ENST00000348495 DPF1Q92782 380 aa20.71■□□□□ 0.91
SSBP4-202ENST00000348495 CCL24O00175 119 aa20.7■□□□□ 0.9
SSBP4-202ENST00000348495 COX7A2P2O60397 106 aa20.7■□□□□ 0.9
SSBP4-202ENST00000348495 KLF5Q13887 457 aaPredicted RBP20.7■□□□□ 0.9
SSBP4-202ENST00000348495 NSUN5P1Q3KNT7 163 aa20.7■□□□□ 0.9
SSBP4-202ENST00000348495 FAM106AQ4KMX7 169 aa20.7■□□□□ 0.9
SSBP4-202ENST00000348495 OR5G3P0C626 314 aa20.7■□□□□ 0.9
SSBP4-202ENST00000348495 FHITP49789 147 aa20.7■□□□□ 0.9
SSBP4-202ENST00000348495 C10orf113Q5VZT2 155 aa20.7■□□□□ 0.9
SSBP4-202ENST00000348495 DPPA3Q6W0C5 159 aa20.7■□□□□ 0.9
SSBP4-202ENST00000348495 ZNF747Q9BV97 191 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms