RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 WIPF1O43516 503 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 ZNF207O43670 478 aaKnown RBP9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 C8orf88P0DMB2 117 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 SELENOTP62341 195 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 ZNF90Q03938 601 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 OR2F1Q13607 317 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 INO80EQ8NBZ0 244 aaPredicted RBP9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 BPIFCQ8NFQ6 507 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 OR2K2Q8NGT1 345 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 METTL26Q96S19 204 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 SMPXQ9UHP9 88 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 ANK2Q01484 3957 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 DNHD1Q96M86 4753 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 IGKV1OR2-108A0A075B7D4 117 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 IGHV7-4-1A0A0J9YVY3 117 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 J3QL48 77 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 IGLV1-51P01701 117 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 IL4P05112 153 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 S100A7P31151 101 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 DEFB114Q30KQ6 69 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 Q5BKY6 102 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 LAMTOR1Q6IAA8 161 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 CYP2G1PQ6ZSU1 146 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 ZNF546Q86UE3 836 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 OR5C1Q8NGR4 320 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 CHAC2Q8WUX2 184 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 TMEM231Q9H6L2 316 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 ZFAND3Q9H8U3 227 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 HSPB11Q9Y547 144 aa9.04□□□□□ -0.96
SPTLC1-202ENST00000337841 WI2-2373I1.2A0A1W2PRP0 233 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 DFFBO76075 338 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 CD5P06127 495 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 VWC2Q2TAL6 325 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 BEAN1Q3B7T3 259 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 LCN12Q6JVE5 192 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 BTNL8Q6UX41 500 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 ADAMTSL5Q6ZMM2 481 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 RBPMS2Q6ZRY4 209 aaKnown RBP9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 S100A7AQ86SG5 101 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 RNF125Q96EQ8 232 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 GRAMD2BQ96HH9 432 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 PBDC1Q9BVG4 233 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 RHPN1-AS1Q9BWJ2 59 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 RABAC1Q9UI14 185 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 WDR83OSQ9Y284 106 aa9.03□□□□□ -0.96
SPTLC1-202ENST00000337841 FXYD6-FXYD2A0A087WZ82 144 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 TRAV25A0A0B4J276 109 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 CHEK1O14757 476 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 AGPAT2O15120 278 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 MPDU1O75352 247 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 IFNA5P01569 189 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 HNRNPCP07910 306 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 CRYBB3P26998 211 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 CAMLGP49069 296 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 LYZP61626 148 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 EGFEM1PQ0D2K5 195 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 CLINT1Q14677 625 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 KPRPQ5T749 579 aaPredicted RBP9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 SCGB1C1Q8TD33 95 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 PPP1R14BQ96C90 147 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 AQP10Q96PS8 301 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 SLC45A2Q9UMX9 530 aa9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 LSM4Q9Y4Z0 139 aaKnown RBP9.02□□□□□ -0.97
SPTLC1-202ENST00000337841 hCG_2014768A0A024R1R8 64 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 IGHV3-49A0A0A0MS15 119 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 UBE2L5PA0A1B0GUS4 154 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 HYPMO75409 117 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 ORM2P19652 201 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 EDN2P20800 178 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 FGF7P21781 194 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 GATA2P23769 480 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 EIF2B2P49770 351 aaKnown RBP9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 AP2S1P53680 142 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 USF2Q15853 346 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 CD300EQ496F6 205 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 PXDC1Q5TGL8 231 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 Q6ZRG5 221 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 ZNF709Q8N972 641 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 ATP5SQ99766 215 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 SMIM3Q9BZL3 60 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 VSIRQ9H7M9 311 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 MLXQ9UH92 298 aa9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 ZNF256Q9Y2P7 627 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1-202ENST00000337841 NOTCH3Q9UM47 2321 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 VWFP04275 2813 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 IGHV3OR16-13A0A075B7E8 117 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 IGHV3-74A0A0B4J1X5 117 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 APOHP02749 345 aaPredicted RBP9□□□□□ -0.97
SPTLC1-202ENST00000337841 KRTAP10-11P60412 298 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 GUCA2BQ16661 112 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 TMEM182Q6ZP80 229 aaPredicted RBP9□□□□□ -0.97
SPTLC1-202ENST00000337841 OR1B1Q8NGR6 318 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 MGST2Q99735 147 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 NEURL2Q9BR09 285 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 TNFSF18Q9UNG2 199 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 RNF24Q9Y225 148 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 U3KQE9 123 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 MGAM2Q2M2H8 2515 aa9□□□□□ -0.97
SPTLC1-202ENST00000337841 IGHV3-66A0A0C4DH42 116 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms