RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CRYBA4P53673 196 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 KLF5Q13887 457 aaPredicted RBP11.17□□□□□ -0.62
SYNE3-201ENST00000334258 SLC25A5P05141 298 aaKnown RBP11.16□□□□□ -0.62
SYNE3-201ENST00000334258 PRCDQ00LT1 54 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 FAM201AQ5SY85 155 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 BVES-AS1Q5T3Y7 98 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 FAM162BQ5T6X4 162 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 DEFB108BQ8NET1 73 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 RND1Q92730 232 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 PGLYRP4Q96LB8 373 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 GTSF1LQ9H1H1 148 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 SPRR3Q9UBC9 169 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 PTPRQQ9UMZ3 2332 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 A0A1B0GV72 72 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 SNAI2O43623 268 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 APOA2P02652 100 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 IGKV1-16P04430 117 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 CSN3P07498 182 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 HBBP68871 147 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 C10orf113Q5VZT2 155 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 SLC25A2Q9BXI2 301 aa11.16□□□□□ -0.62
SYNE3-201ENST00000334258 MAP1AP78559 2803 aaPredicted RBP11.15□□□□□ -0.62
SYNE3-201ENST00000334258 A0A087X0K7 114 aa11.15□□□□□ -0.62
SYNE3-201ENST00000334258 C21orf140B9A014 251 aa11.15□□□□□ -0.62
SYNE3-201ENST00000334258 RBMXL3Q8N7X1 1067 aaKnown RBP11.15□□□□□ -0.62
SYNE3-201ENST00000334258 SVEP1Q4LDE5 3571 aa11.15□□□□□ -0.62
SYNE3-201ENST00000334258 COL27A1Q8IZC6 1860 aaPredicted RBP11.15□□□□□ -0.62
SYNE3-201ENST00000334258 ZGRF1Q86YA3 2104 aa11.15□□□□□ -0.62
SYNE3-201ENST00000334258 FNDC10F2Z333 226 aa11.15□□□□□ -0.62
SYNE3-201ENST00000334258 ZNF138P52744 262 aa11.15□□□□□ -0.62
SYNE3-201ENST00000334258 MBD6Q96DN6 1003 aa11.15□□□□□ -0.62
SYNE3-201ENST00000334258 FAM167A-AS1Q96KT0 104 aa11.15□□□□□ -0.62
SYNE3-201ENST00000334258 MRPL32Q9BYC8 188 aaKnown RBP11.15□□□□□ -0.62
SYNE3-201ENST00000334258 INTS1Q8N201 2190 aaKnown RBP11.15□□□□□ -0.63
SYNE3-201ENST00000334258 TEX50A0A1B0GTY4 177 aa11.15□□□□□ -0.63
SYNE3-201ENST00000334258 TM4SF5O14894 197 aa11.15□□□□□ -0.63
SYNE3-201ENST00000334258 CECR9P0C854 216 aa11.15□□□□□ -0.63
SYNE3-201ENST00000334258 RHOGP84095 191 aa11.15□□□□□ -0.63
SYNE3-201ENST00000334258 CD69Q07108 199 aa11.15□□□□□ -0.63
SYNE3-201ENST00000334258 MOGAT3Q86VF5 341 aa11.15□□□□□ -0.63
SYNE3-201ENST00000334258 DAZAP1Q96EP5 407 aaKnown RBP11.15□□□□□ -0.63
SYNE3-201ENST00000334258 LRBAP50851 2863 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 F2RL2O00254 374 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 UPK2O00526 184 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 CHEK1O14757 476 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 OR2J3O76001 311 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 FAM231DQ6ZW35 169 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 ADTRPQ96IZ2 230 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 ZNF48Q96MX3 618 aaPredicted RBP11.14□□□□□ -0.63
SYNE3-201ENST00000334258 MAP1LC3CQ9BXW4 147 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 IGHV1-24A0A0C4DH33 117 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 SRRM4A7MD48 611 aaKnown RBP11.14□□□□□ -0.63
SYNE3-201ENST00000334258 VWC2LB2RUY7 222 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 RAB9AP51151 201 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 ERHP84090 104 aaKnown RBP11.14□□□□□ -0.63
SYNE3-201ENST00000334258 SHISA2Q6UWI4 295 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 ZNF329Q86UD4 541 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 NPIPB3Q92617 1050 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 ZNRD1Q9P1U0 126 aa11.14□□□□□ -0.63
SYNE3-201ENST00000334258 PGPA6NDG6 321 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 ORM2P19652 201 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 PSG9Q00887 426 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 MZT1Q08AG7 82 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 PDPNQ86YL7 162 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 DEFB125Q8N687 156 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 URB1-AS1Q96HZ7 61 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 TACC2O95359 2948 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 PIEZO1Q92508 2521 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 SRRM5B3KS81 715 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 SPRY3O43610 288 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 P01737 135 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 PAX2Q02962 417 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 ASH1LQ9NR48 2969 aaKnown RBP11.13□□□□□ -0.63
SYNE3-201ENST00000334258 H3BTX0 84 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 PPIAL4GP0DN37 164 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
SYNE3-201ENST00000334258 ARF6P62330 175 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 SSBP2P81877 361 aaPredicted RBP11.13□□□□□ -0.63
SYNE3-201ENST00000334258 C2orf83Q53S99 150 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 Q6ZT83 130 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 GCSAMQ8N6F7 178 aa11.13□□□□□ -0.63
SYNE3-201ENST00000334258 SPTBN1Q01082 2364 aaKnown RBP11.12□□□□□ -0.63
SYNE3-201ENST00000334258 A8MWL6 223 aa11.12□□□□□ -0.63
SYNE3-201ENST00000334258 SLC25A17O43808 307 aa11.12□□□□□ -0.63
SYNE3-201ENST00000334258 ATP5L2Q7Z4Y8 100 aa11.12□□□□□ -0.63
SYNE3-201ENST00000334258 FER1L6-AS2Q96M78 137 aa11.12□□□□□ -0.63
SYNE3-201ENST00000334258 AP1S3Q96PC3 154 aa11.12□□□□□ -0.63
SYNE3-201ENST00000334258 ZNF257Q9Y2Q1 563 aa11.12□□□□□ -0.63
SYNE3-201ENST00000334258 SAA1P0DJI8 122 aaPredicted RBP11.12□□□□□ -0.63
SYNE3-201ENST00000334258 TMEM177Q53S58 311 aa11.12□□□□□ -0.63
SYNE3-201ENST00000334258 PIP4P1Q86T03 277 aa11.12□□□□□ -0.63
SYNE3-201ENST00000334258 OR1L4Q8NGR5 311 aa11.12□□□□□ -0.63
SYNE3-201ENST00000334258 AKAP6Q13023 2319 aa11.12□□□□□ -0.63
SYNE3-201ENST00000334258 KBTBD11-OT1A0A1B0GTJ5 212 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 AZU1P20160 251 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 RPP21Q9H633 154 aaKnown RBP11.11□□□□□ -0.63
SYNE3-201ENST00000334258 RAB9BQ9NP90 201 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 C17orf58Q2M2W7 97 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 C1orf122Q6ZSJ8 110 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 LINC00305Q7Z4B0 112 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms