RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ZC2HC1AQ96GY0 325 aa6.79□□□□□ -1.32
SKA2-201ENST00000330137 RITA1Q96K30 269 aa6.79□□□□□ -1.32
SKA2-201ENST00000330137 HILPDAQ9Y5L2 63 aa6.79□□□□□ -1.32
SKA2-201ENST00000330137 U3KQK5 164 aa6.79□□□□□ -1.32
SKA2-201ENST00000330137 FCGR2BP31994 310 aaPredicted RBP6.79□□□□□ -1.32
SKA2-201ENST00000330137 CEBPDP49716 269 aaPredicted RBP6.79□□□□□ -1.32
SKA2-201ENST00000330137 MRPL14Q6P1L8 145 aaKnown RBP6.79□□□□□ -1.32
SKA2-201ENST00000330137 C8orf86Q6ZUL3 223 aa6.79□□□□□ -1.32
SKA2-201ENST00000330137 PRSS3P2Q8NHM4 247 aa6.79□□□□□ -1.32
SKA2-201ENST00000330137 IFI27L2Q9H2X8 130 aa6.79□□□□□ -1.32
SKA2-201ENST00000330137 KBTBD11-OT1A0A1B0GTJ5 212 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 A0A1B0GUT8 65 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 FBLL1A6NHQ2 334 aaKnown RBP6.78□□□□□ -1.32
SKA2-201ENST00000330137 PROP1O75360 226 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 LPAL2Q16609 132 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 GAGE13Q4V321 117 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 WDR86Q86TI4 376 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 UBALD1Q8TB05 177 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 FXYD5Q96DB9 178 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 IMMP1LQ96LU5 166 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 ZMAT4Q9H898 229 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 DMDP11532 3685 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 USP34Q70CQ2 3546 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 IGKV1OR2-108A0A075B7D4 117 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 TCRBV4S1A1TA0A5B7 111 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 IQCF6A8MYZ5 107 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 H3BMG7 143 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 SCRG1O75711 98 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 GAGE5Q13069 117 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 GAGE6Q13070 117 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 FOXE3Q13461 319 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 DEFB133Q30KQ1 61 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 ABHD17BQ5VST6 288 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 C10orf113Q5VZT2 155 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 PDPNQ86YL7 162 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 CEND1Q8N111 149 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 BCL6BQ8N143 479 aaPredicted RBP6.78□□□□□ -1.32
SKA2-201ENST00000330137 ZNF414Q96IQ9 312 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 PGLYRP4Q96LB8 373 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 LINC00479Q96M42 142 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 LINC00312Q9Y6C7 94 aa6.78□□□□□ -1.32
SKA2-201ENST00000330137 IGHV1-45A0A0A0MS14 117 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 LINC01546A6NGU7 62 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 IGLL5B9A064 214 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 COX7A2P2O60397 106 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 HBDP02042 147 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 TMEM177Q53S58 311 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 RND1Q92730 232 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 FAM110AQ9BQ89 295 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 PRO0461Q9UI25 63 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 MUC6Q6W4X9 2439 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 RTTNQ86VV8 2226 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 SNAI2O43623 268 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 FSTL3O95633 263 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 CER1O95813 267 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 NCR2O95944 276 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 IGHG4P01861 327 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 TMEM30BQ3MIR4 351 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 THAP8Q8NA92 274 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 VPS13AQ96RL7 3174 aa6.77□□□□□ -1.33
SKA2-201ENST00000330137 A0A096LNJ9 63 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 TRAV3A0A0B4J244 114 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 A0A1B0GWB2 263 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 MOSP00540 346 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 EVI2AP22794 236 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 WFDC2Q14508 124 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 ACP7Q6ZNF0 438 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 PLPPR2Q96GM1 343 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 C1QTNF4Q9BXJ3 329 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 SEC16AO15027 2179 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 SLC25A5P05141 298 aaKnown RBP6.76□□□□□ -1.33
SKA2-201ENST00000330137 PAX8Q06710 450 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 FOXI1Q12951 378 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 PPP1R35Q8TAP8 253 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 ITLN1Q8WWA0 313 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 IFI27L1Q96BM0 104 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 RAX2Q96IS3 184 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 CHAC1Q9BUX1 264 aa6.76□□□□□ -1.33
SKA2-201ENST00000330137 OVOL3O00110 214 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 UPK2O00526 184 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 SPINK8P0C7L1 97 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 HOXB4P17483 251 aaPredicted RBP6.75□□□□□ -1.33
SKA2-201ENST00000330137 SUB1P53999 127 aaKnown RBP eCLIP6.75□□□□□ -1.33
SKA2-201ENST00000330137 TBC1D28Q2M2D7 210 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 OR13A1Q8NGR1 328 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 TMEM133Q9H2Q1 129 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 SPAARA0A1B0GVQ0 90 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 SLC25A17O43808 307 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 RNASE2P10153 161 aaKnown RBP6.75□□□□□ -1.33
SKA2-201ENST00000330137 CCL2P13500 99 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 GCSHP23434 173 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 FXYD2P54710 66 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 TCTAP57738 103 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 NXPH1P58417 271 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 INO80CQ6PI98 192 aaPredicted RBP6.75□□□□□ -1.33
SKA2-201ENST00000330137 NAA38Q9BRA0 125 aaKnown RBP6.75□□□□□ -1.33
SKA2-201ENST00000330137 PSG8Q9UQ74 426 aa6.75□□□□□ -1.33
SKA2-201ENST00000330137 TMEM262E9PQX1 116 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 K7ESF4 209 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 NKX2-8O15522 239 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms