RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 PSG1P11464 419 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 MGST2Q99735 147 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 TDGF1P3P51864 188 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 LINC00158P58513 81 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 HGFACQ04756 655 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 TMEM14EPQ6UXP3 125 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 CD5LO43866 347 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 TFF1P04155 84 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 LHX2P50458 406 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 C2orf82Q6UX34 121 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 PMS2P5A8MQ11 134 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 TCRAP04437 139 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 HTN3P15516 51 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 IGLV3-32A0A0A0MS00 114 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 LYZL1Q6UWQ5 148 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 NUP35Q8NFH5 326 aa11.31□□□□□ -0.6
CLCN6-201ENST00000312413 TDRD6O60522 2096 aaKnown RBP11.31□□□□□ -0.6
CLCN6-201ENST00000312413 TMEM8BA6NDV4 472 aa11.3□□□□□ -0.6
CLCN6-201ENST00000312413 CRYGSP22914 178 aa11.3□□□□□ -0.6
CLCN6-201ENST00000312413 DOPEY2Q9Y3R5 2298 aa11.3□□□□□ -0.6
CLCN6-201ENST00000312413 TNFRSF6BO95407 300 aa11.3□□□□□ -0.6
CLCN6-201ENST00000312413 MRPL14Q6P1L8 145 aaKnown RBP11.3□□□□□ -0.6
CLCN6-201ENST00000312413 STHQ8IWL8 128 aa11.3□□□□□ -0.6
CLCN6-201ENST00000312413 C9orf106Q8NAJ2 232 aa11.3□□□□□ -0.6
CLCN6-201ENST00000312413 ZNF48Q96MX3 618 aaPredicted RBP11.3□□□□□ -0.6
CLCN6-201ENST00000312413 C7orf69Q9H7B7 122 aa11.3□□□□□ -0.6
CLCN6-201ENST00000312413 TDRD15B5MCY1 1934 aaKnown RBP11.3□□□□□ -0.6
CLCN6-201ENST00000312413 IGLV3-12A0A075B6K2 115 aa11.3□□□□□ -0.6
CLCN6-201ENST00000312413 ADARB2-AS1A8MUL3 147 aa11.3□□□□□ -0.6
CLCN6-201ENST00000312413 FOXF2Q12947 444 aa11.3□□□□□ -0.6
CLCN6-201ENST00000312413 IGKV2-40A0A087WW87 121 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-201ENST00000312413 IGKV2D-40P01614 121 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-201ENST00000312413 CD24P25063 80 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 EXOC3-AS1Q8N2X6 119 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 PRB3Q04118 309 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-201ENST00000312413 S100A7L2Q5SY68 101 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 FAM90A2PQ658T7 463 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 GATD1Q8NB37 220 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 TNFRSF14Q92956 283 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 IGKV1-5P01602 117 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 ASCL4Q6XD76 172 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 RFNGQ9Y644 331 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 TOMM40O96008 361 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 CD33P20138 364 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 COLCA1Q6ZS62 124 aa11.29□□□□□ -0.6
CLCN6-201ENST00000312413 ADAMTSL1Q8N6G6 1762 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 TRGV4A0A0C4DH28 118 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 TIMM23O14925 209 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 SPINK8P0C7L1 97 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 PRR31Q5SQ13 230 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-201ENST00000312413 EREGO14944 169 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 PAX8Q06710 450 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 ZC2HC1BQ5TFG8 222 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 SIGLEC15Q6ZMC9 328 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 FAM168AQ92567 244 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 RPUSD1Q9UJJ7 312 aaKnown RBP11.28□□□□□ -0.6
CLCN6-201ENST00000312413 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 SP9P0CG40 484 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 C10orf55Q5SWW7 151 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 ARHGEF17Q96PE2 2063 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-201ENST00000312413 ADCYAP1P18509 176 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 NPC2P61916 151 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 ABHD17AQ96GS6 310 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 SCRT1Q9BWW7 348 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
CLCN6-201ENST00000312413 FXYD7P58549 80 aa11.27□□□□□ -0.6
CLCN6-201ENST00000312413 LHFPL4Q7Z7J7 247 aa11.27□□□□□ -0.6
CLCN6-201ENST00000312413 JPT2Q9H910 190 aa11.27□□□□□ -0.6
CLCN6-201ENST00000312413 ANKRD36A6QL64 1941 aa11.27□□□□□ -0.61
CLCN6-201ENST00000312413 CEP250Q9BV73 2442 aa11.27□□□□□ -0.61
CLCN6-201ENST00000312413 A8MWP6 167 aa11.27□□□□□ -0.61
CLCN6-201ENST00000312413 CST9LQ9H4G1 147 aa11.27□□□□□ -0.61
CLCN6-201ENST00000312413 KIF26BQ2KJY2 2108 aa11.27□□□□□ -0.61
CLCN6-201ENST00000312413 ZNF876PQ49A33 203 aa11.27□□□□□ -0.61
CLCN6-201ENST00000312413 ADAMTSL5Q6ZMM2 481 aa11.27□□□□□ -0.61
CLCN6-201ENST00000312413 BMPERQ8N8U9 685 aa11.27□□□□□ -0.61
CLCN6-201ENST00000312413 FGFBP3Q8TAT2 258 aa11.27□□□□□ -0.61
CLCN6-201ENST00000312413 TRGV9Q99603 122 aa11.27□□□□□ -0.61
CLCN6-201ENST00000312413 LOC102723996A0A087X1L8 192 aa11.26□□□□□ -0.61
CLCN6-201ENST00000312413 MST1P26927 711 aa11.26□□□□□ -0.61
CLCN6-201ENST00000312413 PSG3Q16557 428 aa11.26□□□□□ -0.61
CLCN6-201ENST00000312413 MBNL3Q9NUK0 354 aaKnown RBP11.26□□□□□ -0.61
CLCN6-201ENST00000312413 ABCA1O95477 2261 aa11.26□□□□□ -0.61
CLCN6-201ENST00000312413 A0A1B0GWJ7 208 aa11.26□□□□□ -0.61
CLCN6-201ENST00000312413 PAX4O43316 350 aa11.26□□□□□ -0.61
CLCN6-201ENST00000312413 TUBGCP6Q96RT7 1819 aa11.26□□□□□ -0.61
CLCN6-201ENST00000312413 PRB4P10163 310 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-201ENST00000312413 CHAC1Q9BUX1 264 aa11.26□□□□□ -0.61
CLCN6-201ENST00000312413 BRWD3Q6RI45 1802 aa11.26□□□□□ -0.61
CLCN6-201ENST00000312413 LSM4Q9Y4Z0 139 aaKnown RBP11.26□□□□□ -0.61
CLCN6-201ENST00000312413 RALGAPA1Q6GYQ0 2036 aa11.26□□□□□ -0.61
CLCN6-201ENST00000312413 IGKV1-27A0A075B6S5 117 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 TEX43Q6ZNM6 134 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 CITED1Q99966 193 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 C20orf144Q9BQM9 153 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 GVINP1Q7Z2Y8 2422 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 EPOPA6NHQ4 379 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 VCYO14598 125 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms