RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PERPQ96FX8 193 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 MAP1AP78559 2803 aaPredicted RBP9.23□□□□□ -0.93
PTPN2-201ENST00000309660 PEX7O00628 323 aa9.23□□□□□ -0.93
PTPN2-201ENST00000309660 HYPMO75409 117 aa9.23□□□□□ -0.93
PTPN2-201ENST00000309660 CDKN1AP38936 164 aa9.23□□□□□ -0.93
PTPN2-201ENST00000309660 COA6Q5JTJ3 125 aaKnown RBP9.23□□□□□ -0.93
PTPN2-201ENST00000309660 LDLRAD2Q5SZI1 272 aa9.23□□□□□ -0.93
PTPN2-201ENST00000309660 C8orf31Q8N9H6 132 aa9.23□□□□□ -0.93
PTPN2-201ENST00000309660 SERF1AO75920 110 aa9.23□□□□□ -0.93
PTPN2-201ENST00000309660 HTR1DP28221 377 aa9.23□□□□□ -0.93
PTPN2-201ENST00000309660 NDUFS7O75251 213 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 NBEAP1P0C6P0 100 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 FXYD5Q96DB9 178 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 WNT10AQ9GZT5 417 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 HRNRQ86YZ3 2850 aaPredicted RBP9.22□□□□□ -0.93
PTPN2-201ENST00000309660 NCBP2LA6PVI3 153 aaKnown RBP9.22□□□□□ -0.93
PTPN2-201ENST00000309660 DDTP30046 118 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 CAMPP49913 170 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 PKIAP61925 76 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 ZNF329Q86UD4 541 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 IGLV2-8P01709 118 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 PSG1P11464 419 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 TNFRSF14Q92956 283 aa9.22□□□□□ -0.93
PTPN2-201ENST00000309660 GATCO43716 136 aaKnown RBP9.21□□□□□ -0.93
PTPN2-201ENST00000309660 PDLIM4P50479 330 aa9.21□□□□□ -0.93
PTPN2-201ENST00000309660 YPEL3P61236 119 aaPredicted RBP9.21□□□□□ -0.93
PTPN2-201ENST00000309660 RPL19P84098 196 aaKnown RBP9.21□□□□□ -0.93
PTPN2-201ENST00000309660 ZNF664Q8N3J9 261 aa9.21□□□□□ -0.93
PTPN2-201ENST00000309660 RASL11BQ9BPW5 248 aa9.21□□□□□ -0.93
PTPN2-201ENST00000309660 F11RQ9Y624 299 aaKnown RBP9.21□□□□□ -0.93
PTPN2-201ENST00000309660 GCGP01275 180 aa9.21□□□□□ -0.94
PTPN2-201ENST00000309660 USF2Q15853 346 aaPredicted RBP9.21□□□□□ -0.94
PTPN2-201ENST00000309660 THAP8Q8NA92 274 aa9.21□□□□□ -0.94
PTPN2-201ENST00000309660 ASCL2Q99929 193 aa9.21□□□□□ -0.94
PTPN2-201ENST00000309660 OSTCQ9NRP0 149 aa9.21□□□□□ -0.94
PTPN2-201ENST00000309660 CDC42EP3Q9UKI2 254 aa9.21□□□□□ -0.94
PTPN2-201ENST00000309660 LY96Q9Y6Y9 160 aa9.21□□□□□ -0.94
PTPN2-201ENST00000309660 ARL2-SNX15V9GYD0 113 aa9.21□□□□□ -0.94
PTPN2-201ENST00000309660 INS-IGF2F8WCM5 200 aa9.21□□□□□ -0.94
PTPN2-201ENST00000309660 IGF2BP2-AS1Q96M15 143 aa9.21□□□□□ -0.94
PTPN2-201ENST00000309660 ZNF331Q9NQX6 463 aaPredicted RBP9.21□□□□□ -0.94
PTPN2-201ENST00000309660 LOC105371242A0A075B767 164 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 TRAV8-1A0A0A6YYK1 113 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 TEX22C9J3V5 150 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 CORTO00230 105 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 PMCHP20382 165 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 UCNP55089 124 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 BEND2Q8NDZ0 799 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 HSPB9Q9BQS6 159 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 DPM3Q9P2X0 92 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 ZNF253O75346 499 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 SRIP30626 198 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 CX3CL1P78423 397 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 IQCJQ1A5X6 159 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 TOMM20LQ6UXN7 152 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 OR5R1Q8NH85 324 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 TMEM68Q96MH6 324 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 HIGD1AQ9Y241 93 aa9.2□□□□□ -0.94
PTPN2-201ENST00000309660 IGHV3-23P01764 117 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 NHLH1Q02575 133 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 TPTE2P1Q5T6R2 138 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 EXOC3-AS1Q8N2X6 119 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 TMEM116Q8NCL8 245 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 NUDT10Q8NFP7 164 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 NUDT11Q96G61 164 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 C14orf144Q96I85 54 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 UBTD1Q9HAC8 227 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 GNB4Q9HAV0 340 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 CBLN4Q9NTU7 201 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 TP53TG3Q9ULZ0 132 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 NTF3P20783 257 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 TPPP2P59282 170 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 SSTP61278 116 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 FBLN7Q53RD9 439 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 ZNF600Q6ZNG1 722 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 RBM14Q96PK6 669 aaKnown RBP9.19□□□□□ -0.94
PTPN2-201ENST00000309660 TRGV9Q99603 122 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 SSBP4Q9BWG4 385 aaPredicted RBP9.19□□□□□ -0.94
PTPN2-201ENST00000309660 Q9H3A6 140 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 CHODLQ9H9P2 273 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 LPAR2Q9HBW0 351 aa9.19□□□□□ -0.94
PTPN2-201ENST00000309660 CRYGBP07316 175 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 TAS2R60P59551 318 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 KRTDAPP60985 99 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 STXBP6Q8NFX7 210 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 IGHV3OR16-8A0A075B7F1 116 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 IGHV3-35A0A0C4DH35 117 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 NBR2O15453 112 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 CRYGCP07315 174 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 GPR6P46095 362 aaPredicted RBP9.18□□□□□ -0.94
PTPN2-201ENST00000309660 TBX15Q96SF7 602 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 IGLC1P0CG04 106 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 AMTP48728 403 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 FBXL19-AS1Q494R0 122 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 TCF24Q7RTU0 167 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 NAGKQ9UJ70 344 aa9.18□□□□□ -0.94
PTPN2-201ENST00000309660 HIGD1CA8MV81 97 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 CEACAM3P40198 252 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms