RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ZNF705GA8MUZ8 300 aaPredicted RBP3.92□□□□□ -1.78
CKS1B-201ENST00000308987 B9A039 149 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 NDUFB4O95168 129 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 REG1AP05451 166 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 NDUFB7P17568 137 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 HNF1AP20823 631 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 COL8A2P25067 703 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 GPR12P47775 334 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 PPOXP50336 477 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 TPPP2P59282 170 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 LMO4P61968 165 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 NUTF2P61970 127 aaKnown RBP3.92□□□□□ -1.78
CKS1B-201ENST00000308987 C3orf36Q3SXR2 165 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 SPATA46Q5T0L3 261 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 PRAMEF5Q5TYX0 476 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 FAM78BQ5VT40 261 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 PRAMEF6Q5VXH4 476 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 WDR73Q6P4I2 378 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 TEX38Q6PEX7 206 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 WDR82Q6UXN9 313 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 TEX43Q6ZNM6 134 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 PRR18Q8N4B5 295 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 GCSAMQ8N6F7 178 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 NECAP1Q8NC96 275 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 OR4A16Q8NH70 328 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 OR4S2Q8NH73 311 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 SGMS2Q8NHU3 365 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 SLC35E1Q96K37 410 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 MS4A10Q96PG2 267 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 RNF2Q99496 336 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 GGTLC1Q9BX51 225 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 QTRT1Q9BXR0 403 aaKnown RBP3.92□□□□□ -1.78
CKS1B-201ENST00000308987 GNB1LQ9BYB4 327 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 HEYLQ9NQ87 328 aaPredicted RBP3.92□□□□□ -1.78
CKS1B-201ENST00000308987 OSTCQ9NRP0 149 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 TMEM167BQ9NRX6 74 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 PPP1R14DQ9NXH3 145 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 NAGKQ9UJ70 344 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 FOXA2Q9Y261 457 aaPredicted RBP3.92□□□□□ -1.78
CKS1B-201ENST00000308987 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
CKS1B-201ENST00000308987 IGHV2OR16-5A0A0B4J2B6 119 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 C15orf61A6NNL5 157 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 SRRM5B3KS81 715 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 F5H697 171 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 TCAPO15273 167 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 GRPP07492 148 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 OR9G9P0C7N8 305 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 ARL14EPLP0DKL9 152 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 CGB3P0DN86 165 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 CGB7P0DN87 165 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 CRISP2P16562 243 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 GCHFRP30047 84 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 GCH1P30793 250 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 PRDX2P32119 198 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 CHRNA7P36544 502 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 MPV17P39210 176 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 GABRA2P47869 451 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 ATP5G3P48201 142 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 THBS3P49746 956 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 EDDM3BP56851 147 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 HSPE1P61604 102 aaKnown RBP3.91□□□□□ -1.78
CKS1B-201ENST00000308987 AESQ08117 197 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 GAGE1Q13065 139 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 USF2Q15853 346 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-201ENST00000308987 ALKBH6Q3KRA9 238 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 MORN2Q502X0 79 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 OR10J3Q5JRS4 329 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 CST9LP1Q5W188 147 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 RASL11AQ6T310 242 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 PQLC2Q6ZP29 291 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 LRP11Q86VZ4 500 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 OR13A1Q8NGR1 328 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 OCC1Q8TAD7 63 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 CMTM2Q8TAZ6 248 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 MRGPRDQ8TDS7 321 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 GATAD1Q8WUU5 269 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 TMEM190Q8WZ59 177 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 SDSLQ96GA7 329 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 S1PR3Q99500 378 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 MGST2Q99735 147 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 LINC00574Q9H8X3 128 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 LPAR2Q9HBW0 351 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 TMEM14BQ9NUH8 114 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 TMEM106BQ9NUM4 274 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 HIF1ANQ9NWT6 349 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 FAM30AQ9NZY2 134 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 PRNDQ9UKY0 176 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 SLC45A2Q9UMX9 530 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 PSG11Q9UQ72 335 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 TCF19Q9Y242 345 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 ZNF257Q9Y2Q1 563 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 PLXNB1O43157 2135 aa3.91□□□□□ -1.78
CKS1B-201ENST00000308987 TRBV20OR9-2A0A075B6H5 130 aa3.9□□□□□ -1.79
CKS1B-201ENST00000308987 LOC105371242A0A075B767 164 aa3.9□□□□□ -1.79
CKS1B-201ENST00000308987 TRAV38-1A0A0B4J264 116 aa3.9□□□□□ -1.79
CKS1B-201ENST00000308987 A0A1W2PRE2 83 aa3.9□□□□□ -1.79
CKS1B-201ENST00000308987 INS-IGF2F8WCM5 200 aa3.9□□□□□ -1.79
CKS1B-201ENST00000308987 M0R1X1 148 aa3.9□□□□□ -1.79
CKS1B-201ENST00000308987 ISLRO14498 428 aa3.9□□□□□ -1.79
CKS1B-201ENST00000308987 HMGB3O15347 200 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms