RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 TEX29Q8N6K0 151 aa15.85■□□□□ 0.13
TSR1-201ENST00000301364 RAX2Q96IS3 184 aa15.85■□□□□ 0.13
TSR1-201ENST00000301364 NOTCH4Q99466 2003 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 H0YJW9 148 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 NXT2Q9NPJ8 142 aaKnown RBP15.84■□□□□ 0.13
TSR1-201ENST00000301364 IGHV2-26A0A0B4J1V2 119 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.84■□□□□ 0.13
TSR1-201ENST00000301364 PFN1P07737 140 aaKnown RBP15.84■□□□□ 0.13
TSR1-201ENST00000301364 ST6GALNAC3Q8NDV1 305 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 SMIM12Q96EX1 92 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 IGHV3OR16-8A0A075B7F1 116 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.84■□□□□ 0.13
TSR1-201ENST00000301364 H7C2G1 150 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 NUP37Q8NFH4 326 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 GAFA1Q96PS6 74 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 LINC00205P59089 165 aa15.84■□□□□ 0.13
TSR1-201ENST00000301364 TCRAP04437 139 aa15.83■□□□□ 0.13
TSR1-201ENST00000301364 PSG1P11464 419 aa15.83■□□□□ 0.12
TSR1-201ENST00000301364 SAMD13Q5VXD3 122 aa15.83■□□□□ 0.12
TSR1-201ENST00000301364 IGHV3OR16-10A0A075B7F0 116 aa15.83■□□□□ 0.12
TSR1-201ENST00000301364 OR4X2Q8NGF9 303 aa15.83■□□□□ 0.12
TSR1-201ENST00000301364 ZNF256Q9Y2P7 627 aaPredicted RBP15.83■□□□□ 0.12
TSR1-201ENST00000301364 LY6G6EA0A0G2JKS1 128 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 U3KQA8 63 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 RIF1Q5UIP0 2472 aaKnown RBP15.82■□□□□ 0.12
TSR1-201ENST00000301364 A0A1B0GWJ7 208 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 H7C1H1 209 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 CEACAM4O75871 244 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 GZMBP10144 247 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 PAX1P15863 534 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 C19orf54Q5BKX5 351 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 MRPL27Q9P0M9 148 aaKnown RBP15.82■□□□□ 0.12
TSR1-201ENST00000301364 ACACAQ13085 2346 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 TANC1Q9C0D5 1861 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 LEPP41159 167 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 CIRBPQ14011 172 aaKnown RBP15.82■□□□□ 0.12
TSR1-201ENST00000301364 AMMECR1LQ6DCA0 310 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 MS4A6AQ9H2W1 248 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 COX6B1P14854 86 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 FAM71F2Q6NXP2 309 aa15.82■□□□□ 0.12
TSR1-201ENST00000301364 RNF166Q96A37 237 aaPredicted RBP15.82■□□□□ 0.12
TSR1-201ENST00000301364 RNASE2P10153 161 aaKnown RBP15.81■□□□□ 0.12
TSR1-201ENST00000301364 COPS9Q8WXC6 57 aa15.81■□□□□ 0.12
TSR1-201ENST00000301364 SLC25A39Q9BZJ4 359 aaPredicted RBP15.81■□□□□ 0.12
TSR1-201ENST00000301364 HEATR1Q9H583 2144 aaKnown RBP15.81■□□□□ 0.12
TSR1-201ENST00000301364 LYNX1G3V0Z9 82 aa15.81■□□□□ 0.12
TSR1-201ENST00000301364 LYNX1P0DP58 116 aa15.81■□□□□ 0.12
TSR1-201ENST00000301364 NUTF2P61970 127 aaKnown RBP15.81■□□□□ 0.12
TSR1-201ENST00000301364 PRB3Q04118 309 aaPredicted RBP15.81■□□□□ 0.12
TSR1-201ENST00000301364 C5orf30Q96GV9 206 aa15.81■□□□□ 0.12
TSR1-201ENST00000301364 SLX1AQ9BQ83 275 aa15.81■□□□□ 0.12
TSR1-201ENST00000301364 TMEM170BQ5T4T1 132 aa15.81■□□□□ 0.12
TSR1-201ENST00000301364 F2Z2F3 143 aa15.81■□□□□ 0.12
TSR1-201ENST00000301364 C2orf88Q9BSF0 95 aa15.81■□□□□ 0.12
TSR1-201ENST00000301364 ALKBH7Q9BT30 221 aaPredicted RBP15.81■□□□□ 0.12
TSR1-201ENST00000301364 FAM181BA6NEQ2 426 aa15.81■□□□□ 0.12
TSR1-201ENST00000301364 SPCS1Q9Y6A9 102 aa15.81■□□□□ 0.12
TSR1-201ENST00000301364 IGHV1-3A0A0C4DH29 117 aa15.8■□□□□ 0.12
TSR1-201ENST00000301364 MRPL52Q86TS9 123 aaKnown RBP15.8■□□□□ 0.12
TSR1-201ENST00000301364 PMS2P5A8MQ11 134 aa15.8■□□□□ 0.12
TSR1-201ENST00000301364 ZNF664Q8N3J9 261 aa15.8■□□□□ 0.12
TSR1-201ENST00000301364 CCL19Q99731 98 aa15.8■□□□□ 0.12
TSR1-201ENST00000301364 RHOGP84095 191 aa15.8■□□□□ 0.12
TSR1-201ENST00000301364 IGKV1-39P01597 117 aa15.8■□□□□ 0.12
TSR1-201ENST00000301364 IGKV1D-39P04432 117 aa15.8■□□□□ 0.12
TSR1-201ENST00000301364 MYOD1P15172 320 aa15.8■□□□□ 0.12
TSR1-201ENST00000301364 ERVK11-1P61568 191 aa15.8■□□□□ 0.12
TSR1-201ENST00000301364 NUP35Q8NFH5 326 aa15.8■□□□□ 0.12
TSR1-201ENST00000301364 CD24P25063 80 aa15.79■□□□□ 0.12
TSR1-201ENST00000301364 DOCK8Q8NF50 2099 aa15.79■□□□□ 0.12
TSR1-201ENST00000301364 ZNF124Q15973 351 aa15.79■□□□□ 0.12
TSR1-201ENST00000301364 DUX5Q96PT3 197 aa15.79■□□□□ 0.12
TSR1-201ENST00000301364 GEMIN7Q9H840 131 aaKnown RBP15.79■□□□□ 0.12
TSR1-201ENST00000301364 THBDP07204 575 aa15.79■□□□□ 0.12
TSR1-201ENST00000301364 FER1L5A0AVI2 2057 aa15.79■□□□□ 0.12
TSR1-201ENST00000301364 TICRRQ7Z2Z1 1910 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 IGHV2-5P01817 119 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 NCOR1P1Q9H4R4 102 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 LINC01559Q495D7 138 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 ZNF672Q499Z4 452 aaPredicted RBP15.78■□□□□ 0.12
TSR1-201ENST00000301364 IFI27L1Q96BM0 104 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 SCRT1Q9BWW7 348 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 MRPL16Q9NX20 251 aaKnown RBP15.78■□□□□ 0.12
TSR1-201ENST00000301364 ZNF407Q9C0G0 2248 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 FBLN7Q53RD9 439 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 UBE2L6O14933 153 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 C3orf79P0CE67 100 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 LYPD6BQ8NI32 183 aa15.78■□□□□ 0.12
TSR1-201ENST00000301364 CACNG7P62955 275 aa15.77■□□□□ 0.12
TSR1-201ENST00000301364 OOSP1A8MZH6 123 aa15.77■□□□□ 0.12
TSR1-201ENST00000301364 SRSF1Q07955 248 aaKnown RBP eCLIP15.77■□□□□ 0.12
TSR1-201ENST00000301364 WNT2P09544 360 aa15.77■□□□□ 0.11
TSR1-201ENST00000301364 Q0VG73 95 aa15.77■□□□□ 0.11
TSR1-201ENST00000301364 ZNF726P1Q15940 193 aa15.77■□□□□ 0.11
TSR1-201ENST00000301364 RRN3P1Q2M238 152 aa15.77■□□□□ 0.11
TSR1-201ENST00000301364 EXOC3-AS1Q8N2X6 119 aa15.77■□□□□ 0.11
TSR1-201ENST00000301364 Q8NFD4 153 aa15.77■□□□□ 0.11
TSR1-201ENST00000301364 IGKV3-20P01619 116 aa15.77■□□□□ 0.11
TSR1-201ENST00000301364 SEC11AP67812 179 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 382 ms