RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 RNASE8Q8TDE3 154 aaKnown RBP8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 CRIM1Q9NZV1 1036 aa8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 NPIPB5A8MRT5 1133 aa8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 CDPF1Q6NVV7 123 aa8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 C18orf12Q96KH6 178 aa8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 TRAV5A0A0B4J249 113 aa8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 TSKUQ8WUA8 353 aa8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 CECR9P0C854 216 aa8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 IGLV3-21P80748 117 aaPredicted RBP8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 UNQ6494/PRO21346Q6UXR6 183 aa8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 GTSCR1Q86UQ5 136 aa8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 TMEM86BQ8N661 226 aa8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 ZNF703Q9H7S9 590 aaPredicted RBP8.95□□□□□ -0.98
PKNOX1-201ENST00000291547 PRR32B1ATL7 298 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 UPK2O00526 184 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 PLPPR1Q8TBJ4 325 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 UTRNP46939 3433 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 WNK2Q9Y3S1 2297 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 GAGE12BA1L429 117 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 ID3Q02535 119 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 RNF125Q96EQ8 232 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 SLC50A1Q9BRV3 221 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 COA6Q5JTJ3 125 aaKnown RBP8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 SAP25Q8TEE9 199 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 TRAV1-1A0A0B4J248 108 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 PSG1P11464 419 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 EFNB3Q15768 340 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 RTN4RL2Q86UN3 420 aa8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 REPIN1Q9BWE0 567 aaKnown RBP8.94□□□□□ -0.98
PKNOX1-201ENST00000291547 CACNA1EQ15878 2313 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 SSBP2P81877 361 aaPredicted RBP8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 SMPXQ9UHP9 88 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 GFRA3O60609 400 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 RFPL3SP0C7P2 107 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 LINC00158P58513 81 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 PSG7Q13046 419 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 MPV17L2Q567V2 206 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 WFDC1Q9HC57 220 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 WDR83OSQ9Y284 106 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 TDRD6O60522 2096 aaKnown RBP8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 CCL1P22362 96 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 CEACAM8P31997 349 aaPredicted RBP8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 TIMP3P35625 211 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 ABCA4P78363 2273 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 GUSBP1Q15486 140 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 ATP1A1-AS1Q5TC04 95 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 MORN3Q6PF18 240 aaPredicted RBP8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 C1orf122Q6ZSJ8 110 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 GATD1Q8NB37 220 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 LINC01560Q8TB33 94 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 AGMATQ9BSE5 352 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 C9JQL5 133 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 IGFBP3P17936 291 aaPredicted RBP8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 APOBEC3AP31941 199 aaPredicted RBP8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 PVRIGQ6DKI7 326 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 VSIRQ9H7M9 311 aa8.93□□□□□ -0.98
PKNOX1-201ENST00000291547 C15orf61A6NNL5 157 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 TNFRSF6BO95407 300 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 LCN12Q6JVE5 192 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 SDK2Q58EX2 2172 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 ABCA7Q8IZY2 2146 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 A0A087X0K7 114 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 IGHV2-70DA0A0C4DH43 119 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 TCRBV4S1A1TA0A5B7 111 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 TEX43Q6ZNM6 134 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 TMEM105Q8N8V8 129 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 C1QTNF5Q9BXJ0 243 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 JPT2Q9H910 190 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 EDA2RQ9HAV5 297 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 CNOT1A5YKK6 2376 aaKnown RBP8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 NOTCH4Q99466 2003 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 LGALS1P09382 135 aaKnown RBP8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 S100A7L2Q5SY68 101 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 ASCL4Q6XD76 172 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 TMEM256Q8N2U0 113 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 MGST2Q99735 147 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 SAA2-SAA4A0A096LPE2 208 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 SAA2P0DJI9 122 aaPredicted RBP8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 CCL3L1P16619 93 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 FAM27E3Q08E93 113 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 STPG1Q5TH74 334 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 C2orf82Q6UX34 121 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 FAM89BQ8N5H3 189 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 LINC00312Q9Y6C7 94 aa8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 SPTAN1Q13813 2472 aaKnown RBP8.92□□□□□ -0.98
PKNOX1-201ENST00000291547 hDV102S1A0JD36 115 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 CD5LO43866 347 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 RAMP3O60896 148 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 NPC2P61916 151 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 LYPD6BQ8NI32 183 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 CCL25O15444 150 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 NCR2O95944 276 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 RBX1P62877 108 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 ROS1P08922 2347 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 F2Z2F3 143 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 PRR31Q5SQ13 230 aa8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 ZNF837Q96EG3 531 aaPredicted RBP8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 LSM4Q9Y4Z0 139 aaKnown RBP8.91□□□□□ -0.98
PKNOX1-201ENST00000291547 TOMM40O96008 361 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms