RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 MALSU1Q96EH3 234 aa-2.87□□□□□ -2.87
LMBR1-222ENST00000638959 SMIM12Q96EX1 92 aa-2.87□□□□□ -2.87
LMBR1-222ENST00000638959 ANKRD36BP1Q96IX9 119 aa-2.87□□□□□ -2.87
LMBR1-222ENST00000638959 MAP1LC3CQ9BXW4 147 aa-2.87□□□□□ -2.87
LMBR1-222ENST00000638959 TP53TG1Q9Y2A0 90 aa-2.87□□□□□ -2.87
LMBR1-222ENST00000638959 MYH10P35580 1976 aa-2.87□□□□□ -2.87
LMBR1-222ENST00000638959 PI4KAP42356 2102 aa-2.87□□□□□ -2.87
LMBR1-222ENST00000638959 PKHD1L1Q86WI1 4243 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 TRAV9-1A0A075B6T8 112 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 A0A087WTM6 91 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 METTL15A6NJ78 407 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 SC5DO75845 299 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 LINC00614P0C842 121 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 TERB2Q8NHR7 220 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 PPTC7Q8NI37 304 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 IFT81Q8WYA0 676 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 IMP4Q96G21 291 aaKnown RBP-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 RMND1Q9NWS8 449 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 IDI2-AS1Q9NZ38 188 aa-2.88□□□□□ -2.87
LMBR1-222ENST00000638959 ATRQ13535 2644 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 TTC41PQ6P2S7 1318 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 IGHV1-69-2A0A0G2JMI3 117 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 LIN7AO14910 233 aaPredicted RBP-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 PDE6GP18545 87 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 TNFAIP6P98066 277 aaPredicted RBP-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 EDDM3AQ14507 147 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 OR10J3Q5JRS4 329 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 PIP5KL1Q5T9C9 394 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 KATNAL2Q8IYT4 538 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 HIST3H2BBQ8N257 126 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 GDPD1Q8N9F7 314 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 HAVCR2Q8TDQ0 301 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 SLC37A2Q8TED4 501 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 GLYATL2Q8WU03 294 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 H1FXQ92522 213 aaKnown RBP-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 ROPN1LQ96C74 230 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 TSGA13Q96PP4 275 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 HDHD2Q9H0R4 259 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 C15orf41Q9Y2V0 281 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 SPTA1P02549 2419 aa-2.89□□□□□ -2.87
LMBR1-222ENST00000638959 GADD45GO95257 159 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 KCNE1P15382 129 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 CXCL2P19875 107 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 UBE2KP61086 200 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 RPS24P62847 133 aaKnown RBP-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 SNCBQ16143 134 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 C1orf194Q5T5A4 169 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 SSX6Q7RTT6 188 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 OR10D3Q8NH80 312 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 TMEM56Q96MV1 263 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 LIMD2Q9BT23 127 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 MROQ9BYG7 248 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 CLEC2DQ9UHP7 191 aa-2.9□□□□□ -2.87
LMBR1-222ENST00000638959 PCNX1Q96RV3 2341 aa-2.91□□□□□ -2.87
LMBR1-222ENST00000638959 MYO18BQ8IUG5 2567 aa-2.91□□□□□ -2.87
LMBR1-222ENST00000638959 A6NN06 94 aa-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 E7EUB6 86 aa-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 F5H5K5 113 aa-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 TNRC18O15417 2968 aaPredicted RBP-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 CXCL3P19876 107 aa-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 DEKP35659 375 aaKnown RBP-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 OR10A3P58181 314 aa-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 MRPL52Q86TS9 123 aaKnown RBP-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 Q8IYB0 196 aa-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 PBOV1Q9GZY1 135 aa-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 HES4Q9HCC6 221 aa-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 PRO0255Q9UI72 69 aa-2.91□□□□□ -2.88
LMBR1-222ENST00000638959 SUPT3HB4E1H0 165 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 GOLGA8MH3BSY2 632 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 HIST1H2BOP23527 126 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 HIST1H2BBP33778 126 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 HIST1H2BDP58876 126 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 DAOAP59103 153 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 VSNL1P62760 191 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 HIST1H2BCP62807 126 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 HIST2H2BEQ16778 126 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 HIST2H2BFQ5QNW6 126 aaPredicted RBP-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 C8orf74Q6P047 294 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 RPL22L1Q6P5R6 122 aaKnown RBP-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 CD200R1LQ6Q8B3 271 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 C5orf46Q6UWT4 87 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 LINC00299Q6ZSB3 139 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 OR5D14Q8NGL3 314 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 DDI1Q8WTU0 396 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 HIST1H2BHQ93079 126 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 HIST1H2BNQ99877 126 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 HIST1H2BMQ99879 126 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 CCDC77Q9BR77 488 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 CCDC94Q9BW85 323 aaPredicted RBP-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 RSPH9Q9H1X1 276 aaPredicted RBP-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 BCL2L10Q9HD36 194 aa-2.92□□□□□ -2.88
LMBR1-222ENST00000638959 TRBV20OR9-2A0A075B6H5 130 aa-2.93□□□□□ -2.88
LMBR1-222ENST00000638959 C7orf71A4D174 169 aa-2.93□□□□□ -2.88
LMBR1-222ENST00000638959 HMMRO75330 724 aa-2.93□□□□□ -2.88
LMBR1-222ENST00000638959 MPC1LP0DKB6 136 aa-2.93□□□□□ -2.88
LMBR1-222ENST00000638959 RPS3P23396 243 aaKnown RBP eCLIP-2.93□□□□□ -2.88
LMBR1-222ENST00000638959 PEX19P40855 299 aa-2.93□□□□□ -2.88
LMBR1-222ENST00000638959 DSCR4P56555 118 aaPredicted RBP-2.93□□□□□ -2.88
LMBR1-222ENST00000638959 FOXI2Q6ZQN5 318 aa-2.93□□□□□ -2.88
LMBR1-222ENST00000638959 PDCL2Q8N4E4 241 aa-2.93□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms