RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CXorf67Q86X51 503 aaPredicted RBP7.4□□□□□ -1.22
TTC28-208ENST00000612946 SPSB2Q99619 263 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 TFF3Q07654 80 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 BHLHA9Q7RTU4 235 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 FAM89BQ8N5H3 189 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 FAM208BQ5VWN6 2430 aa7.4□□□□□ -1.23
TTC28-208ENST00000612946 TCF20Q9UGU0 1960 aaKnown RBP7.4□□□□□ -1.23
TTC28-208ENST00000612946 FAM159AQ6UWV7 190 aa7.4□□□□□ -1.23
TTC28-208ENST00000612946 CALYQ9NYX4 217 aa7.4□□□□□ -1.23
TTC28-208ENST00000612946 GREM1O60565 184 aa7.4□□□□□ -1.23
TTC28-208ENST00000612946 DRD3P35462 400 aa7.4□□□□□ -1.23
TTC28-208ENST00000612946 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.4□□□□□ -1.23
TTC28-208ENST00000612946 RNASE7Q9H1E1 156 aaKnown RBP7.4□□□□□ -1.23
TTC28-208ENST00000612946 ATOX1O00244 68 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 R3HDMLQ9H3Y0 253 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 CEACAM4O75871 244 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 RAX2Q96IS3 184 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 CFHR5Q9BXR6 569 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 NUP210Q8TEM1 1887 aaPredicted RBP7.39□□□□□ -1.23
TTC28-208ENST00000612946 HLA-DMBP28068 263 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 KLRD1Q13241 179 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 OCC1Q8TAD7 63 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 KLK15Q9H2R5 256 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 GP6Q9HCN6 339 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 PDE6HQ13956 83 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 DLL3Q9NYJ7 618 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 UPK2O00526 184 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 LHFPL1Q86WI0 220 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 SPATA25Q9BR10 227 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 C15orf61A6NNL5 157 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 FABP5P3A8MUU1 101 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 LEPROTO15243 131 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 MAGEA5P43359 124 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 SIGLEC12Q96PQ1 595 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 H0YIZ8 118 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 J3KRW8 73 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 LYPD1Q8N2G4 141 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 SIGLEC8Q9NYZ4 499 aa7.39□□□□□ -1.23
TTC28-208ENST00000612946 PLXNA4Q9HCM2 1894 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 A0A1W2PPV9 198 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 TEX45Q8NA69 505 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 IDI2-AS1Q9NZ38 188 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 Q6ZS49 121 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 OTOGLQ3ZCN5 2332 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 VWC2LB2RUY7 222 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 ZNF721Q8TF20 911 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 BVES-AS1Q5T3Y7 98 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 IQCF6A8MYZ5 107 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 PRKNO60260 465 aaPredicted RBP7.38□□□□□ -1.23
TTC28-208ENST00000612946 C5orf47Q569G3 176 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 SHISA5Q8N114 240 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 EEF1AKMT3Q96AZ1 226 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 TCRBV4S1A1TA0A5B7 111 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 TMEM229AB2RXF0 380 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 COL9A2Q14055 689 aaPredicted RBP7.38□□□□□ -1.23
TTC28-208ENST00000612946 SIT1Q9Y3P8 196 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 SHISA3A0PJX4 238 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 SHISA9B4DS77 424 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 PRTN3P24158 256 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 C9orf50Q5SZB4 431 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 TRGV8A0A0C4DH27 118 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 K7EMI3 77 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 SLC25A28Q96A46 364 aa7.38□□□□□ -1.23
TTC28-208ENST00000612946 NPC2P61916 151 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 RASL10BQ96S79 203 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 C6orf106Q9H6K1 298 aaPredicted RBP7.37□□□□□ -1.23
TTC28-208ENST00000612946 PILRBQ9UKJ0 227 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 NLRC5Q86WI3 1866 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 YPEL3P61236 119 aaPredicted RBP7.37□□□□□ -1.23
TTC28-208ENST00000612946 TMEM256Q8N2U0 113 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 EFNB3Q15768 340 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 AMN1Q8IY45 258 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 DDB2Q92466 427 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 ZNF492Q9P255 531 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 H3BQ85 93 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 TRAV24A0A0B4J272 114 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 NAPSAO96009 420 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 CCL11P51671 97 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 GFERP55789 205 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 DEFB125Q8N687 156 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 PROB1E7EW31 1015 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 SPINT1O43278 529 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 CSPG4Q6UVK1 2322 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 NXPH1P58417 271 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 FAM106AQ4KMX7 169 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 WDR83OSQ9Y284 106 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 CACNA1AO00555 2505 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 FHL5Q5TD97 284 aa7.37□□□□□ -1.23
TTC28-208ENST00000612946 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.36□□□□□ -1.23
TTC28-208ENST00000612946 SAA2-SAA4A0A096LPE2 208 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 VGLL1Q99990 258 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 MST1P26927 711 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 PRSS41Q7RTY9 318 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 FBXL15Q9H469 300 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 TMEM74BQ9NUR3 256 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 ZDHHC16Q969W1 377 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 SHANK3Q9BYB0 1731 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 HIST1H4AP62805 103 aaKnown RBP7.36□□□□□ -1.23
TTC28-208ENST00000612946 TMEM14EPQ6UXP3 125 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 LOXL2Q9Y4K0 774 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms