RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TMUB2Q71RG4 321 aa11.08□□□□□ -0.64
COMMD4-225ENST00000569245 HAPLN4Q86UW8 402 aa11.08□□□□□ -0.64
COMMD4-225ENST00000569245 PRSS46E5RG02 174 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 CORTO00230 105 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 TAAR5O14804 337 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 C4BPBP20851 252 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 MFAP2P55001 183 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 HBG1P69891 147 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 HBG2P69892 147 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 ARL16Q0P5N6 197 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 OR10P1Q8NGE3 313 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 OR9G4Q8NGQ1 327 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
COMMD4-225ENST00000569245 PINX1Q96BK5 328 aaKnown RBP11.07□□□□□ -0.64
COMMD4-225ENST00000569245 BSCL2Q96G97 398 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-225ENST00000569245 B9D2Q9BPU9 175 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 ARL6Q9H0F7 186 aa11.07□□□□□ -0.64
COMMD4-225ENST00000569245 PAIP2BQ9ULR5 123 aaKnown RBP11.07□□□□□ -0.64
COMMD4-225ENST00000569245 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.06□□□□□ -0.64
COMMD4-225ENST00000569245 BCL2L11O43521 198 aa11.06□□□□□ -0.64
COMMD4-225ENST00000569245 IFNA4P05014 189 aa11.06□□□□□ -0.64
COMMD4-225ENST00000569245 ATP6V1FQ16864 119 aa11.06□□□□□ -0.64
COMMD4-225ENST00000569245 TMEM217Q8N7C4 229 aa11.06□□□□□ -0.64
COMMD4-225ENST00000569245 OR1S2Q8NGQ3 325 aa11.06□□□□□ -0.64
COMMD4-225ENST00000569245 OR5C1Q8NGR4 320 aa11.06□□□□□ -0.64
COMMD4-225ENST00000569245 ARPC5LQ9BPX5 153 aa11.06□□□□□ -0.64
COMMD4-225ENST00000569245 GGACTQ9BVM4 153 aa11.06□□□□□ -0.64
COMMD4-225ENST00000569245 FBXL17Q9UF56 701 aa11.06□□□□□ -0.64
COMMD4-225ENST00000569245 LSM4Q9Y4Z0 139 aaKnown RBP11.06□□□□□ -0.64
COMMD4-225ENST00000569245 DMRT1Q9Y5R6 373 aa11.06□□□□□ -0.64
COMMD4-225ENST00000569245 IGLV11-55A0A075B6I3 123 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 KANTRA0A1W2PQU2 76 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 CYB5BO43169 146 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 DFFBO76075 338 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 NDUFB8O95169 186 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 IGHV3-23P01764 117 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 GP9P14770 177 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 HIST1H1BP16401 226 aaKnown RBP11.05□□□□□ -0.64
COMMD4-225ENST00000569245 GPX4P36969 197 aaPredicted RBP11.05□□□□□ -0.64
COMMD4-225ENST00000569245 SLC38A11Q08AI6 406 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 OPCMLQ14982 345 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 FAM209BQ5JX69 171 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 OR8G2PQ6IF36 304 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 S4R3C0 116 aa11.05□□□□□ -0.64
COMMD4-225ENST00000569245 PPP5D1E7EU14 171 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 FNDC10F2Z333 226 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 BMPR1BO00238 502 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 DLK1P80370 383 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 VWC2Q2TAL6 325 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 SLC25A24Q6NUK1 477 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 CACNG8Q8WXS5 425 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 EEF1AKMT3Q96AZ1 226 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 FANCD2OSQ96PS1 177 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 SMIM3Q9BZL3 60 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 WFDC1Q9HC57 220 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 CYTL1Q9NRR1 136 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 PEMTQ9UBM1 199 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 BOLA1Q9Y3E2 137 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 SMAD5-AS1Q9Y6J3 95 aa11.04□□□□□ -0.64
COMMD4-225ENST00000569245 GGCTO75223 188 aaKnown RBP11.03□□□□□ -0.64
COMMD4-225ENST00000569245 IGLV1-51P01701 117 aa11.03□□□□□ -0.64
COMMD4-225ENST00000569245 ETFRF1Q6IPR1 90 aa11.03□□□□□ -0.64
COMMD4-225ENST00000569245 CLEC19AQ6UXS0 136 aa11.03□□□□□ -0.64
COMMD4-225ENST00000569245 LILRB2Q8N423 598 aa11.03□□□□□ -0.64
COMMD4-225ENST00000569245 ATP5SQ99766 215 aa11.03□□□□□ -0.64
COMMD4-225ENST00000569245 TMEM147Q9BVK8 224 aa11.03□□□□□ -0.64
COMMD4-225ENST00000569245 THYN1Q9P016 225 aa11.03□□□□□ -0.64
COMMD4-225ENST00000569245 RPS10-NUDT3A0A1W2PQS6 291 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 I3L2K1 104 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 JTBO76095 146 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 OR2C1O95371 312 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 ARL3P36405 182 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 OPRK1P41145 380 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 ZNF266Q14584 549 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 CLINT1Q14677 625 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 IL34Q6ZMJ4 242 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 SLC16A13Q7RTY0 426 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 SLC51BQ86UW2 128 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 MISP3Q96FF7 219 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 CXorf58Q96LI9 332 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 ASCL2Q99929 193 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 PARD6GQ9BYG4 376 aaPredicted RBP11.02□□□□□ -0.65
COMMD4-225ENST00000569245 FNDC4Q9H6D8 234 aaPredicted RBP11.02□□□□□ -0.65
COMMD4-225ENST00000569245 UQCC1Q9NVA1 299 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 COL7A1Q02388 2944 aa11.02□□□□□ -0.65
COMMD4-225ENST00000569245 DNAH9Q9NYC9 4486 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 TRBV7-1A0A0A6YYK4 115 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 BORCS7-ASMTA0A0B4J1R7 106 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 ZNF320A2RRD8 509 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 MT-CO2P00403 227 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 CLEC3BP05452 202 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 CSN3P07498 182 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 NHLRC4P0CG21 123 aaPredicted RBP11.01□□□□□ -0.65
COMMD4-225ENST00000569245 MLANAQ16655 118 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 RPL7L1Q6DKI1 246 aaKnown RBP11.01□□□□□ -0.65
COMMD4-225ENST00000569245 UBAC2Q8NBM4 344 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 STOML3Q8TAV4 291 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 ARV1Q9H2C2 271 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 NPVFQ9HCQ7 196 aa11.01□□□□□ -0.65
COMMD4-225ENST00000569245 MFSD2BA6NFX1 497 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms