RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 OR8H1Q8NGG4 311 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OR4C13Q8NGP0 309 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OR5H6Q8NGV6 325 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OR8U1Q8NH10 309 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OR9G1Q8NH87 305 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 GRPEL2Q8TAA5 225 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RTN4IP1Q8WWV3 396 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 CACNG8Q8WXS5 425 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 PP6455Q8WZ26 134 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 ARPC1AQ92747 370 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RPEQ96AT9 228 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 FAM3DQ96BQ1 224 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 C12orf43Q96C57 262 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 MRPS24Q96EL2 167 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 PGLYRP3Q96LB9 341 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 CNBD2Q96M20 576 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 KCTD7Q96MP8 289 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 Q96MT0 163 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 S100A13Q99584 98 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 NABP2Q9BQ15 211 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 ZNF251Q9BRH9 671 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 AGMATQ9BSE5 352 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 DCUN1D5Q9BTE7 237 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 NDUFAF3Q9BU61 184 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 C9orf16Q9BUW7 83 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 PECRQ9BY49 303 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 NAA50Q9GZZ1 169 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 COMMD4Q9H0A8 199 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 GABARAPL1Q9H0R8 117 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 DNTTIP1Q9H147 329 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 METTL9Q9H1A3 318 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 WFDC10AQ9H1F0 79 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 OR51E2Q9H255 320 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 RGCCQ9H4X1 137 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 PLEKHA1Q9HB21 404 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 FGF20Q9NP95 211 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 TMEM138Q9NPI0 162 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 PARP11Q9NR21 331 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 PLEKHJ1Q9NW61 149 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SDHAF2Q9NX18 166 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 SMPD3Q9NY59 655 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 RDH8Q9NYR8 311 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 USE1Q9NZ43 259 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 CNOT2Q9NZN8 540 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 GNG12Q9UBI6 72 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 GLS2Q9UI32 602 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 ATPIF1Q9UII2 106 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 TRAPPC2LQ9UL33 140 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 POLDIP2Q9Y2S7 368 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 LSM2Q9Y333 95 aaKnown RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 ORC6Q9Y5N6 252 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 TSSC4Q9Y5U2 329 aaPredicted RBP0.76□□□□□ -2.29
SMG1-212ENST00000566328 NUBP2Q9Y5Y2 271 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 LINC00312Q9Y6C7 94 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 TMEM14AQ9Y6G1 99 aa0.76□□□□□ -2.29
SMG1-212ENST00000566328 PKHD1L1Q86WI1 4243 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 RNF213Q63HN8 5207 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 IGKV3-7A0A075B6H7 116 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 IGLV11-55A0A075B6I3 123 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 TRAV41A0A0B4J266 112 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 LOC100506127A0A0U1RQW1 187 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 TEX50A0A1B0GTY4 177 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 A0A1B0GUS0 222 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 TMEM235A6NFC5 223 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 EFCAB10A6NFE3 127 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 IFITM5A6NNB3 132 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 TMEM14DPA8MWL7 114 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 TRDCB7Z8K6 153 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 H0YJW9 148 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 M0R1X1 148 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 SULT1C2O00338 296 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 SLC22A1O15245 554 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 DENRO43583 198 aaKnown RBP0.75□□□□□ -2.29
SMG1-212ENST00000566328 LANCL1O43813 399 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 ORC5O43913 435 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 SSX5O60225 188 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 PDCD6O75340 191 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 OR2J3O76001 311 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 OR2F2O95006 317 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 S1PR2O95136 353 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 CNIH1O95406 144 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 ATP6V1G2O95670 118 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 CRYZL1O95825 349 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 NAPSAO96009 420 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 CYB5AP00167 134 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 CA2P00918 260 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 IGLV2-23P01705 113 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 IGHG2P01859 326 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 PMP2P02689 132 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 TRGV3P03979 118 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 CSN2P05814 226 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 CRYGBP07316 175 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 CD7P09564 240 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 UCHL1P09936 223 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 UBCP0CG48 685 aaKnown RBP0.75□□□□□ -2.29
SMG1-212ENST00000566328 SAA2P0DJI9 122 aaPredicted RBP0.75□□□□□ -2.29
SMG1-212ENST00000566328 AREGP15514 252 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 MYL12AP19105 171 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 CRHBPP24387 322 aa0.75□□□□□ -2.29
SMG1-212ENST00000566328 GADD45AP24522 165 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms