RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 OR1S2Q8NGQ3 325 aa12.09□□□□□ -0.47
COMMD4-206ENST00000562610 RCHY1Q96PM5 261 aa12.09□□□□□ -0.47
COMMD4-206ENST00000562610 RNF2Q99496 336 aa12.09□□□□□ -0.47
COMMD4-206ENST00000562610 MAGT1Q9H0U3 335 aa12.09□□□□□ -0.47
COMMD4-206ENST00000562610 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
COMMD4-206ENST00000562610 TRAV6A0A075B6T7 132 aa12.08□□□□□ -0.48
COMMD4-206ENST00000562610 IFNA21P01568 189 aa12.08□□□□□ -0.48
COMMD4-206ENST00000562610 OR10J1P30954 320 aa12.08□□□□□ -0.48
COMMD4-206ENST00000562610 NUDT15Q9NV35 164 aa12.08□□□□□ -0.48
COMMD4-206ENST00000562610 HUWE1Q7Z6Z7 4374 aaKnown RBP12.08□□□□□ -0.48
COMMD4-206ENST00000562610 IGHV3-66A0A0C4DH42 116 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 OR4C46A6NHA9 309 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 MPTX1A8MV57 137 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 WRBO00258 174 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 SYNGR2O43760 224 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 IGKV1-17P01599 117 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 TCRBP04435 133 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 IGLC1P0CG04 106 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 RAB11AP62491 216 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 HAGHQ16775 308 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 ST8SIA2Q92186 375 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 SLC35E1Q96K37 410 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 CIB3Q96Q77 187 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-206ENST00000562610 METTL26Q96S19 204 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 TM2D3Q9BRN9 247 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 WDR12Q9GZL7 423 aaKnown RBP12.07□□□□□ -0.48
COMMD4-206ENST00000562610 UBQLN2Q9UHD9 624 aa12.07□□□□□ -0.48
COMMD4-206ENST00000562610 TFPI2P48307 235 aa12.06□□□□□ -0.48
COMMD4-206ENST00000562610 ATP5IP56385 69 aaPredicted RBP12.06□□□□□ -0.48
COMMD4-206ENST00000562610 ZNF846Q147U1 533 aa12.06□□□□□ -0.48
COMMD4-206ENST00000562610 TMEM231Q9H6L2 316 aa12.06□□□□□ -0.48
COMMD4-206ENST00000562610 FAM240BA0A1B0GVZ2 78 aa12.05□□□□□ -0.48
COMMD4-206ENST00000562610 H3BP45 60 aa12.05□□□□□ -0.48
COMMD4-206ENST00000562610 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
COMMD4-206ENST00000562610 APOHP02749 345 aaPredicted RBP12.05□□□□□ -0.48
COMMD4-206ENST00000562610 NPPCP23582 126 aa12.05□□□□□ -0.48
COMMD4-206ENST00000562610 RPP30P78346 268 aaKnown RBP12.05□□□□□ -0.48
COMMD4-206ENST00000562610 MZT2BQ6NZ67 158 aa12.05□□□□□ -0.48
COMMD4-206ENST00000562610 TCF24Q7RTU0 167 aa12.05□□□□□ -0.48
COMMD4-206ENST00000562610 Q8WTZ3 238 aa12.05□□□□□ -0.48
COMMD4-206ENST00000562610 NARS2Q96I59 477 aaKnown RBP12.05□□□□□ -0.48
COMMD4-206ENST00000562610 SPATA25Q9BR10 227 aa12.05□□□□□ -0.48
COMMD4-206ENST00000562610 BATF3Q9NR55 127 aa12.05□□□□□ -0.48
COMMD4-206ENST00000562610 RBMY1BA6NDE4 496 aaKnown RBP12.04□□□□□ -0.48
COMMD4-206ENST00000562610 RBMY1EA6NEQ0 496 aaKnown RBP12.04□□□□□ -0.48
COMMD4-206ENST00000562610 RBMY1DP0C7P1 496 aaKnown RBP12.04□□□□□ -0.48
COMMD4-206ENST00000562610 NKX2-1P43699 371 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-206ENST00000562610 YPEL3P61236 119 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-206ENST00000562610 RPL11P62913 178 aaKnown RBP12.04□□□□□ -0.48
COMMD4-206ENST00000562610 IAH1Q2TAA2 248 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-206ENST00000562610 SPANXN5Q5MJ07 72 aa12.04□□□□□ -0.48
COMMD4-206ENST00000562610 GBGT1Q8N5D6 347 aa12.04□□□□□ -0.48
COMMD4-206ENST00000562610 MITD1Q8WV92 249 aa12.04□□□□□ -0.48
COMMD4-206ENST00000562610 VSIRQ9H7M9 311 aa12.04□□□□□ -0.48
COMMD4-206ENST00000562610 TBC1D24Q9ULP9 559 aa12.04□□□□□ -0.48
COMMD4-206ENST00000562610 A0A1W2PS18 150 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 ZFP92A6NM28 416 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 SSSCA1O60232 199 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 UPK1BO75841 260 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 TOMM40O96008 361 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 IL4P05112 153 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 CD5P06127 495 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 H2AFB2P0C5Z0 115 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 GPX4P36969 197 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-206ENST00000562610 POLR2GP62487 172 aaKnown RBP eCLIP12.03□□□□□ -0.48
COMMD4-206ENST00000562610 PAFAH1B2P68402 229 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 ASAH1Q13510 395 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 ODF3L2Q3SX64 289 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 OR4D5Q8NGN0 318 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 SEC22CQ9BRL7 303 aa12.03□□□□□ -0.48
COMMD4-206ENST00000562610 CCSO14618 274 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 DFFBO76075 338 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 RD3LP0DJH9 198 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 CRYBB3P26998 211 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 GAMTQ14353 236 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 FAM90A2PQ658T7 463 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 LINC00322Q6ZN03 302 aaPredicted RBP12.02□□□□□ -0.49
COMMD4-206ENST00000562610 ENKURQ8TC29 256 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 GRAMD2BQ96HH9 432 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 GGTLC1Q9BX51 225 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 RETNQ9HD89 108 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 GSKIPQ9P0R6 139 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 STRAPQ9Y3F4 350 aaKnown RBP12.02□□□□□ -0.49
COMMD4-206ENST00000562610 TENM3Q9P273 2699 aa12.02□□□□□ -0.49
COMMD4-206ENST00000562610 LOC102724200A0A096LPH7 203 aaPredicted RBP12.01□□□□□ -0.49
COMMD4-206ENST00000562610 FAM25EA8MYX2 175 aa12.01□□□□□ -0.49
COMMD4-206ENST00000562610 DNASE2O00115 360 aaPredicted RBP12.01□□□□□ -0.49
COMMD4-206ENST00000562610 HNRNPCP07910 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
COMMD4-206ENST00000562610 P2RY1P47900 373 aa12.01□□□□□ -0.49
COMMD4-206ENST00000562610 ID3Q02535 119 aa12.01□□□□□ -0.49
COMMD4-206ENST00000562610 USF2Q15853 346 aaPredicted RBP12.01□□□□□ -0.49
COMMD4-206ENST00000562610 WFDC3Q8IUB2 231 aa12.01□□□□□ -0.49
COMMD4-206ENST00000562610 LILRB2Q8N423 598 aa12.01□□□□□ -0.49
COMMD4-206ENST00000562610 ZBTB8BQ8NAP8 495 aaPredicted RBP12.01□□□□□ -0.49
COMMD4-206ENST00000562610 ZNF431Q8TF32 576 aaPredicted RBP12.01□□□□□ -0.49
COMMD4-206ENST00000562610 CITED4Q96RK1 184 aa12.01□□□□□ -0.49
COMMD4-206ENST00000562610 MS4A6AQ9H2W1 248 aa12.01□□□□□ -0.49
COMMD4-206ENST00000562610 PSENENQ9NZ42 101 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms