RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 SSTP61278 116 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 NUTF2P61970 127 aaKnown RBP1.86□□□□□ -2.11
LRRC28-218ENST00000560236 RHOGP84095 191 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 PPP1R8Q12972 351 aaKnown RBP1.86□□□□□ -2.11
LRRC28-218ENST00000560236 PDZK1IP1Q13113 114 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 DGCR6Q14129 220 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 CLINT1Q14677 625 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 PSG5Q15238 335 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 UBE2V2Q15819 145 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 NEDD8Q15843 81 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 TRIM16LQ309B1 348 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 ACOT6Q3I5F7 207 aaPredicted RBP1.86□□□□□ -2.11
LRRC28-218ENST00000560236 MORN2Q502X0 79 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 GLYATQ6IB77 296 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 ERICH5Q6P6B1 374 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 FAM159AQ6UWV7 190 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 SSX7Q7RTT5 188 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 TTC9CQ8N5M4 171 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 OR51L1Q8NGJ5 315 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 OR6K6Q8NGW6 343 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 GRPEL2Q8TAA5 225 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 CNIH3Q8TBE1 160 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 FANK1Q8TC84 345 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 OR51E1Q8TCB6 317 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 THEM6Q8WUY1 208 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 PP6455Q8WZ26 134 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 FCGR1BQ92637 280 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 C7orf34Q96L11 122 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 CLCC1Q96S66 551 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 TEAD3Q99594 435 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 PHB2Q99623 299 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 NMNAT2Q9BZQ4 307 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 REEP1Q9H902 201 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 NEK6Q9HC98 313 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 ACOT13Q9NPJ3 140 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 DAZ1Q9NQZ3 744 aaKnown RBP1.86□□□□□ -2.11
LRRC28-218ENST00000560236 FAM206AQ9NX38 181 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 GNG12Q9UBI6 72 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 BAIAP2Q9UQB8 552 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 LSM2Q9Y333 95 aaKnown RBP1.86□□□□□ -2.11
LRRC28-218ENST00000560236 WASHC3Q9Y3C0 194 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 TPRKBQ9Y3C4 175 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 IGKV2-28A0A075B6P5 120 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 TMEM30CPA0ZSE6 113 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 H7C2Y5 167 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 FFAR1O14842 300 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 RAB29O14966 203 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 YPEL1O60688 119 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF682O95780 498 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 DHFRP00374 187 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 IFNGP01579 166 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 IGKV2D-28P01615 120 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 HLA-AP01891 365 aaKnown RBP1.85□□□□□ -2.11
LRRC28-218ENST00000560236 HLA-DQB1P01920 261 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 TTRP02766 147 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 CDK1P06493 297 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 CTSDP07339 412 aaPredicted RBP1.85□□□□□ -2.11
LRRC28-218ENST00000560236 HIST1H1BP16401 226 aaKnown RBP1.85□□□□□ -2.11
LRRC28-218ENST00000560236 CCL1P22362 96 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 GADD45AP24522 165 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 FGF9P31371 208 aaPredicted RBP1.85□□□□□ -2.11
LRRC28-218ENST00000560236 KDELR2P33947 212 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 FUSP35637 526 aaKnown RBP eCLIP1.85□□□□□ -2.11
LRRC28-218ENST00000560236 IFNGR2P38484 337 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 SERPINB10P48595 397 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 MTPNP58546 118 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 NCS1P62166 190 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 HAMPP81172 84 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 YIF1BQ5BJH7 314 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 OR2B11Q5JQS5 317 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 TMEM69Q5SWH9 247 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 C6orf183Q5T699 404 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 LINC01590Q5TEZ4 76 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 TMEM236Q5W0B7 351 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 THOC7Q6I9Y2 204 aaKnown RBP1.85□□□□□ -2.11
LRRC28-218ENST00000560236 ELP2Q6IA86 826 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 OR2T5Q6IEZ7 315 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 CLEC19AQ6UXS0 136 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 Q6ZSA8 131 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF679Q8IYX0 411 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 HS3ST5Q8IZT8 346 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 OR2T29Q8NH02 315 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 OR10A6Q8NH74 314 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 IL22RA2Q969J5 263 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 EEF1AKMT3Q96AZ1 226 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 PYURFQ96I23 114 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 TPD52L3Q96J77 140 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 YPEL2Q96QA6 119 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 OR2A7Q96R45 310 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 ATP6V0BQ99437 205 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 CCDC32Q9BV29 185 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 MRPL20Q9BYC9 149 aaKnown RBP1.85□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF436Q9C0F3 470 aaPredicted RBP1.85□□□□□ -2.11
LRRC28-218ENST00000560236 CHST5Q9GZS9 411 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 DCSTAMPQ9H295 470 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 DPH3P1Q9H4G8 78 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF331Q9NQX6 463 aaPredicted RBP1.85□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF586Q9NXT0 402 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 EHFQ9NZC4 300 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 GHRLQ9UBU3 117 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms