RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 BSNQ9UPA5 3926 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 A0A0U1RQK1 487 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 ZNF320A2RRD8 509 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 OOSP1A8MZH6 123 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 GGTLC3B5MD39 225 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 TEX22C9J3V5 150 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 LYNX1G3V0Z9 82 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 ISLRO14498 428 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 GCGP01275 180 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 LYNX1P0DP58 116 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 GATA2P23769 480 aaPredicted RBP6.48□□□□□ -1.37
SMAD3-212ENST00000559937 CRYBB3P26998 211 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 CNN1P51911 297 aaKnown RBP6.48□□□□□ -1.37
SMAD3-212ENST00000559937 LY6DQ14210 128 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 RPEL1Q2QD12 228 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 C4orf17Q53FE4 359 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 PYY3Q5JQD4 70 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 TPTE2P1Q5T6R2 138 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 PATE2Q6UY27 113 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 OR5AU1Q8NGC0 362 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 PAXXQ9BUH6 204 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 ZNF355PQ9NSJ1 428 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 CDC42EP3Q9UKI2 254 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 DMRT1Q9Y5R6 373 aa6.48□□□□□ -1.37
SMAD3-212ENST00000559937 SPTBN1Q01082 2364 aaKnown RBP6.48□□□□□ -1.37
SMAD3-212ENST00000559937 IGHV3-72A0A0B4J1Y9 119 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 XKRY2A2RUG3 117 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 PGPEP1LA6NFU8 196 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 ODF3BA8MYP8 253 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 K7EN84 100 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 NDUFA3O95167 84 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 MT-ND6P03923 174 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 PLA2G2AP14555 144 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 HTR1DP28221 377 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 LGALS4P56470 323 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 SUMO1P63165 101 aaKnown RBP6.47□□□□□ -1.37
SMAD3-212ENST00000559937 CENPWQ5EE01 88 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 GFI1BQ5VTD9 330 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 FAM231DQ6ZW35 169 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 NPBQ8NG41 125 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 OR5R1Q8NH85 324 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 SMIM12Q96EX1 92 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 RITA1Q96K30 269 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 IGF2BP2-AS1Q96M15 143 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 PACRGQ96M98 296 aaPredicted RBP6.47□□□□□ -1.37
SMAD3-212ENST00000559937 HIST1H2BLQ99880 126 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 CHRDL1Q9BU40 450 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 TNFRSF19Q9NS68 423 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 DPM3Q9P2X0 92 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 ONECUT1Q9UBC0 465 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 TRAPPC1Q9Y5R8 145 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 V9GYV3 84 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 NOTCH2Q04721 2471 aa6.47□□□□□ -1.37
SMAD3-212ENST00000559937 PLXNB1O43157 2135 aa6.46□□□□□ -1.37
SMAD3-212ENST00000559937 C22orf46C9J442 243 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 IGLV2-8P01709 118 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 AMBPP02760 352 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 FABP4P15090 132 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 PRTN3P24158 256 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 COX7A1P24310 79 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 CNTFRP26992 372 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 MYCNOSP40205 109 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 MFAP2P55001 183 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 ERVFC1-1P60608 527 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 SSBP2P81877 361 aaPredicted RBP6.46□□□□□ -1.38
SMAD3-212ENST00000559937 ZNF90Q03938 601 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 JOSD1Q15040 202 aaPredicted RBP6.46□□□□□ -1.38
SMAD3-212ENST00000559937 WDR73Q6P4I2 378 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 SRSF12Q8WXF0 261 aaKnown RBP6.46□□□□□ -1.38
SMAD3-212ENST00000559937 CFHR4Q92496 578 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 TMEM18Q96B42 140 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 FXYD5Q96DB9 178 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 MISP3Q96FF7 219 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 SSBP3Q9BWW4 388 aaPredicted RBP6.46□□□□□ -1.38
SMAD3-212ENST00000559937 FBXL15Q9H469 300 aa6.46□□□□□ -1.38
SMAD3-212ENST00000559937 AURKAIP1Q9NWT8 199 aaPredicted RBP6.46□□□□□ -1.38
SMAD3-212ENST00000559937 MRPL36Q9P0J6 103 aaKnown RBP6.46□□□□□ -1.38
SMAD3-212ENST00000559937 USP9XQ93008 2570 aaPredicted RBP6.46□□□□□ -1.38
SMAD3-212ENST00000559937 UBR5O95071 2799 aaPredicted RBP6.46□□□□□ -1.38
SMAD3-212ENST00000559937 RELNP78509 3460 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 USP9YO00507 2555 aaPredicted RBP6.45□□□□□ -1.38
SMAD3-212ENST00000559937 DOPEY2Q9Y3R5 2298 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 LOC105371242A0A075B767 164 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 TRAV5A0A0B4J249 113 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 PEX7O00628 323 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 TIMM23O14925 209 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 NBR2O15453 112 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 HYPMO75409 117 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 REG1AP05451 166 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 HIST1H1BP16401 226 aaKnown RBP6.45□□□□□ -1.38
SMAD3-212ENST00000559937 GPR6P46095 362 aaPredicted RBP6.45□□□□□ -1.38
SMAD3-212ENST00000559937 CLEC12BQ2HXU8 276 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 MINOS1Q5TGZ0 78 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 MORN5Q5VZ52 161 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 HCP5Q6MZN7 132 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 CCDC144NLQ6NUI1 221 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 RASL11AQ6T310 242 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 LINC00305Q7Z4B0 112 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 ZNF329Q86UD4 541 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 GNB1LQ9BYB4 327 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms