RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 MRPL30Q8TCC3 161 aaKnown RBP1.66□□□□□ -2.14
SCFD1-219ENST00000556413 PYDC1Q8WXC3 89 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 PP6455Q8WZ26 134 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 UBE2E2Q96LR5 201 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 PHB2Q99623 299 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 SULT4A1Q9BR01 284 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 SELENOIQ9C0D9 397 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 PLGRKTQ9HBL7 147 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 TAF9BQ9HBM6 251 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 OR2S2Q9NQN1 319 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 CCL28Q9NRJ3 127 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 CLEC2DQ9UHP7 191 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 PEX16Q9Y5Y5 336 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 TMEM14AQ9Y6G1 99 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 IGLV2-18A0A075B6J9 118 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 A0A075B6Q4 140 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 IGHV3-66A0A0C4DH42 116 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 IGKV1-6A0A0C4DH72 117 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 TCRBV3S1A0A5B6 114 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 OR11H12B2RN74 326 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 G3V2T6 193 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 M0R1X1 148 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 DYNC1I1O14576 645 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 RS1O15537 224 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 CNIH1O95406 144 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 CSN2P05814 226 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 SCTP09683 121 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 PRB4P10163 310 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-219ENST00000556413 DBTP11182 482 aaKnown RBP1.65□□□□□ -2.15
SCFD1-219ENST00000556413 ANXA8P13928 327 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 FGF9P31371 208 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF93P35789 620 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-219ENST00000556413 ETV1P50549 477 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 CLDN12P56749 244 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 PPP3R1P63098 170 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 RHOGP84095 191 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 RUNX1Q01196 453 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 ATP6AP1Q15904 470 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 TNXAQ16473 311 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 RPEL1Q2QD12 228 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 DEFB116Q30KQ4 102 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 MORN2Q502X0 79 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM244Q5VVB8 128 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 KDM4DQ6B0I6 523 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 DEGS2Q6QHC5 323 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 UNQ9165/PRO28630Q6UXU0 137 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 Q6ZSR3 168 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF833PQ6ZTB9 187 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 C6orf201Q7Z4U5 140 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 LYPD6Q86Y78 171 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 APRG1Q8IVJ8 170 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 GID4Q8IVV7 300 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF565Q8N9K5 539 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 CHST4Q8NCG5 386 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 OR8J1Q8NGP2 316 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 OR5AK2Q8NH90 309 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 KCNG3Q8TAE7 436 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 APH1BQ8WW43 257 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 ACOT12Q8WYK0 555 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM106AQ96A25 262 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 ASB9Q96DX5 294 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 HIST1H4GQ99525 98 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 FAAP24Q9BTP7 215 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 GABARAPL1Q9H0R8 117 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 METTL9Q9H1A3 318 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 OR2D2Q9H210 308 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF230Q9UIE0 474 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-219ENST00000556413 POMPQ9Y244 141 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 ARL2BPQ9Y2Y0 163 aa1.65□□□□□ -2.15
SCFD1-219ENST00000556413 KLK5Q9Y337 293 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-219ENST00000556413 A0A1B0GW64 132 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM213A2RRL7 107 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 C2orf70A6NJV1 201 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 IGLL5B9A064 214 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 MCRIP1C9JLW8 97 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 E7EUB6 86 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 J3QRE1 110 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 BET1O15155 118 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 MAGEB3O15480 346 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 GYG2O15488 501 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 SOCS1O15524 211 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 AIREO43918 545 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 SULT1C4O75897 302 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 DCTN3O75935 186 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 NDUFA3O95167 84 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 CRYZL1O95825 349 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 FADS2O95864 444 aaKnown RBP1.64□□□□□ -2.15
SCFD1-219ENST00000556413 FAM107AO95990 144 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 IGLV2-23P01705 113 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 LIMS3P0CW19 117 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 LIMS4P0CW20 117 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 OR5H8P0DN80 308 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 PTHLHP12272 177 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 HTR2CP28335 458 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 SLC6A1P30531 599 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 CEACAM6P40199 344 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 NMUP48645 174 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 INSL3P51460 131 aa1.64□□□□□ -2.15
SCFD1-219ENST00000556413 GBX2P52951 348 aaPredicted RBP1.64□□□□□ -2.15
SCFD1-219ENST00000556413 ACTR3P61158 418 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms