RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZP3P21754 424 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 OR10J1P30954 320 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 GPR183P32249 361 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 ARL3P36405 182 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 MYCNOSP40205 109 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 AP2S1P53680 142 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-221ENST00000555773 NSUN5P1Q3KNT7 163 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 THAP8Q8NA92 274 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 OR11H1Q8NG94 326 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 OR4F17Q8NGA8 305 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 OR4F4Q96R69 305 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 A0A0D9SG52 128 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 RNF222A6NCQ9 220 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 BMPR1BO00238 502 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 TAAR5O14804 337 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 IGLC1P0CG04 106 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 YPEL3P61236 119 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-221ENST00000555773 AKR1C1Q04828 323 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 RELQ04864 619 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-221ENST00000555773 ZNF616Q08AN1 781 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 RAB31Q13636 194 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 ZNF345Q14585 488 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 ZFP69Q49AA0 526 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 HIST2H2BDQ6DRA6 164 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 TEPPQ6URK8 271 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 TREML4Q6UXN2 200 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 GPHB5Q86YW7 130 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 RAX2Q96IS3 184 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 TRGV9Q99603 122 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 ATP5SQ99766 215 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 TENM1Q9UKZ4 2725 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 STAB1Q9NY15 2570 aa9.6□□□□□ -0.87
SHMT2-221ENST00000555773 IGHV4OR15-8A0A075B7B6 117 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 A0A087WW49 117 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 ZFP92A6NM28 416 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 MPDU1O75352 247 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 IFNA5P01569 189 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 IGKV1-17P01599 117 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 TRBV12-3P01733 135 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 ADMP35318 185 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 CD300CQ08708 224 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 FHL3Q13643 280 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 CLINT1Q14677 625 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 RPEL1Q2QD12 228 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 FAM106AQ4KMX7 169 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 KCNRGQ8N5I3 272 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 SPATA3Q8NHX4 192 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 Q8WTZ3 238 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 CHRDL1Q9BU40 450 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
SHMT2-221ENST00000555773 LSM4Q9Y4Z0 139 aaKnown RBP9.59□□□□□ -0.87
SHMT2-221ENST00000555773 IGKV1D-37A0A075B6S9 117 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 PPP5D1E7EU14 171 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 M0QZ24 198 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 NDUFA4O00483 81 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 OR2C1O95371 312 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 CFDP00746 253 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-221ENST00000555773 RD3LP0DJH9 198 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 SELENOTP62341 195 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 KLF5Q13887 457 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-221ENST00000555773 ZNF266Q14584 549 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 TIGITQ495A1 244 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 BTNL8Q6UX41 500 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 ZNF600Q6ZNG1 722 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 PARD6GQ9BYG4 376 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-221ENST00000555773 FBXL17Q9UF56 701 aa9.58□□□□□ -0.88
SHMT2-221ENST00000555773 IGKV1OR2-108A0A075B7D4 117 aa9.57□□□□□ -0.88
SHMT2-221ENST00000555773 BORCS7-ASMTA0A0B4J1R7 106 aa9.57□□□□□ -0.88
SHMT2-221ENST00000555773 TOMM40O96008 361 aa9.57□□□□□ -0.88
SHMT2-221ENST00000555773 CXCL2P19875 107 aa9.57□□□□□ -0.88
SHMT2-221ENST00000555773 HOXD3P31249 432 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-221ENST00000555773 EIF2B2P49770 351 aaKnown RBP9.57□□□□□ -0.88
SHMT2-221ENST00000555773 DEFB136Q30KP8 78 aa9.57□□□□□ -0.88
SHMT2-221ENST00000555773 SCGB1C1Q8TD33 95 aa9.57□□□□□ -0.88
SHMT2-221ENST00000555773 SMIM3Q9BZL3 60 aa9.57□□□□□ -0.88
SHMT2-221ENST00000555773 WDR61Q9GZS3 305 aaKnown RBP9.57□□□□□ -0.88
SHMT2-221ENST00000555773 WFDC1Q9HC57 220 aa9.57□□□□□ -0.88
SHMT2-221ENST00000555773 UBE2L5PA0A1B0GUS4 154 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 LGALS9O00182 355 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 AGPAT2O15120 278 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 JTBO76095 146 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 PF4P02776 101 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 C4BPBP20851 252 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 CAMLGP49069 296 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 ZNF90Q03938 601 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 LGALSLQ3ZCW2 172 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-221ENST00000555773 CYP2G1PQ6ZSU1 146 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 TMUB2Q71RG4 321 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 C1QL4Q86Z23 238 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 OR51G1Q8NGK1 321 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 DUX3Q96PT4 197 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 ARPC5LQ9BPX5 153 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 SLC45A2Q9UMX9 530 aa9.56□□□□□ -0.88
SHMT2-221ENST00000555773 KANTRA0A1W2PQU2 76 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 C17orf112F2Z3M2 114 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 K7EMT4 169 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 YIF1AO95070 293 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 PSG1P11464 419 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 FGF7P21781 194 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms