RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ASCL2Q99929 193 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 HEATR5BQ9P2D3 2071 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 ATP5J2P56134 94 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 DEPPQ9NTK1 212 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 FABP5P3A8MUU1 101 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 HOXA3O43365 443 aaPredicted RBP11.6□□□□□ -0.55
VTI1B-204ENST00000554659 HBDP02042 147 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 PAX1P15863 534 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 FOXL1Q12952 345 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 TMEM190Q8WZ59 177 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 EFNA2O43921 213 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 RNASE4P34096 147 aaKnown RBP11.6□□□□□ -0.55
VTI1B-204ENST00000554659 LTBRP36941 435 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 TSKUQ8WUA8 353 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 NBR2O15453 112 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 AMBPP02760 352 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 TDGF1P13385 188 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 CCL3L1P16619 93 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 TIMP3P35625 211 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 DPM2O94777 84 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 TREML4Q6UXN2 200 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 ZNF479Q96JC4 524 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 TRAV2A0A0B4J234 112 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 PYYP10082 97 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 NMSQ5H8A3 153 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 FGFBP3Q8TAT2 258 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 ITLN2Q8WWU7 325 aaPredicted RBP11.59□□□□□ -0.55
VTI1B-204ENST00000554659 RNF125Q96EQ8 232 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 TRAV8-4A0A0B4J246 113 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 TRAV21A0A0B4J279 112 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 A8MWV9 139 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 PPBPP02775 128 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 CFAP161Q6P656 301 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 SLC25A15Q9Y619 301 aa11.59□□□□□ -0.55
VTI1B-204ENST00000554659 SCN8AQ9UQD0 1980 aa11.58□□□□□ -0.55
VTI1B-204ENST00000554659 BRWD3Q6RI45 1802 aa11.58□□□□□ -0.56
VTI1B-204ENST00000554659 SRSF6Q13247 344 aaKnown RBP11.58□□□□□ -0.56
VTI1B-204ENST00000554659 KIR3DL3Q8N743 410 aa11.58□□□□□ -0.56
VTI1B-204ENST00000554659 TMEM133Q9H2Q1 129 aa11.58□□□□□ -0.56
VTI1B-204ENST00000554659 IGKV1-27A0A075B6S5 117 aa11.58□□□□□ -0.56
VTI1B-204ENST00000554659 TNFSF13O75888 250 aa11.58□□□□□ -0.56
VTI1B-204ENST00000554659 GREB1Q4ZG55 1949 aa11.58□□□□□ -0.56
VTI1B-204ENST00000554659 IFI27P40305 119 aaPredicted RBP11.58□□□□□ -0.56
VTI1B-204ENST00000554659 GGTLC1Q9BX51 225 aa11.58□□□□□ -0.56
VTI1B-204ENST00000554659 NXT2Q9NPJ8 142 aaKnown RBP11.58□□□□□ -0.56
VTI1B-204ENST00000554659 PSG8Q9UQ74 426 aa11.58□□□□□ -0.56
VTI1B-204ENST00000554659 LYL1P12980 280 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 CLEC19AQ6UXS0 136 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 GBF1Q92538 1859 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 AGMATQ9BSE5 352 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 CEP250Q9BV73 2442 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 SLC25A20O43772 301 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 QRFPP83859 136 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 CSRP2Q16527 193 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 RNF182Q8N6D2 247 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 GAGE13Q4V321 117 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 ST20Q9HBF5 79 aa11.57□□□□□ -0.56
VTI1B-204ENST00000554659 PNRC2Q9NPJ4 139 aaKnown RBP11.57□□□□□ -0.56
VTI1B-204ENST00000554659 ZFP36L1Q07352 338 aaKnown RBP11.56□□□□□ -0.56
VTI1B-204ENST00000554659 SAMD5Q5TGI4 173 aa11.56□□□□□ -0.56
VTI1B-204ENST00000554659 CLPSP04118 112 aa11.56□□□□□ -0.56
VTI1B-204ENST00000554659 TMEM14EPQ6UXP3 125 aa11.56□□□□□ -0.56
VTI1B-204ENST00000554659 LINC01587Q99440 93 aa11.56□□□□□ -0.56
VTI1B-204ENST00000554659 CCL19Q99731 98 aa11.56□□□□□ -0.56
VTI1B-204ENST00000554659 NAA38Q9BRA0 125 aaKnown RBP11.56□□□□□ -0.56
VTI1B-204ENST00000554659 PF4P02776 101 aa11.56□□□□□ -0.56
VTI1B-204ENST00000554659 SRSF1Q07955 248 aaKnown RBP eCLIP11.56□□□□□ -0.56
VTI1B-204ENST00000554659 LINC01551Q86U37 167 aa11.56□□□□□ -0.56
VTI1B-204ENST00000554659 GGNQ86UU5 652 aa11.56□□□□□ -0.56
VTI1B-204ENST00000554659 PLNP26678 52 aa11.56□□□□□ -0.56
VTI1B-204ENST00000554659 SELENOKQ9Y6D0 94 aa11.56□□□□□ -0.56
VTI1B-204ENST00000554659 TRGV2A0A075B6R0 118 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 A0A0U1RRA0 63 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 SEC11AP67812 179 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 GAGE2BQ13066 116 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 GAGE2EQ4V326 116 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 RASL11AQ6T310 242 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 C8orf46Q8TAG6 207 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 GAGE2DQ9UEU5 116 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 ZDBF2Q9HCK1 2354 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 IGHV1-18A0A0C4DH31 117 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 RPP25LQ8N5L8 163 aaKnown RBP11.55□□□□□ -0.56
VTI1B-204ENST00000554659 TNFRSF14Q92956 283 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 XIRP1Q702N8 1843 aaKnown RBP11.55□□□□□ -0.56
VTI1B-204ENST00000554659 TRBV6-6A0A0A6YYG2 114 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 PINLYPA6NC86 204 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 GHRHP01286 108 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 PPIFP30405 207 aaKnown RBP11.55□□□□□ -0.56
VTI1B-204ENST00000554659 HSD52Q0P140 79 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 CYSLTR1Q9Y271 337 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 CFHR1Q03591 330 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 ACTL10Q5JWF8 245 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 IGKCP01834 107 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 TFF1P04155 84 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 CD7P09564 240 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 IFI27L1Q96BM0 104 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 MS4A6AQ9H2W1 248 aa11.55□□□□□ -0.56
VTI1B-204ENST00000554659 IGKV1-5P01602 117 aa11.54□□□□□ -0.56
VTI1B-204ENST00000554659 GZMBP10144 247 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms