RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 YPEL3P61236 119 aaPredicted RBP17.36■□□□□ 0.37
FOXA1-204ENST00000554607 LSM3P62310 102 aaKnown RBP17.36■□□□□ 0.37
FOXA1-204ENST00000554607 RNASE11Q8TAA1 199 aaKnown RBP17.36■□□□□ 0.37
FOXA1-204ENST00000554607 FAM210BQ96KR6 192 aa17.36■□□□□ 0.37
FOXA1-204ENST00000554607 NEU1Q99519 415 aa17.36■□□□□ 0.37
FOXA1-204ENST00000554607 PKD1P98161 4303 aa17.35■□□□□ 0.37
FOXA1-204ENST00000554607 TMEM189A5PLL7 270 aa17.35■□□□□ 0.37
FOXA1-204ENST00000554607 FAM90A26D6RGX4 464 aa17.35■□□□□ 0.37
FOXA1-204ENST00000554607 H3BMM0 161 aa17.35■□□□□ 0.37
FOXA1-204ENST00000554607 IGLC1P0CG04 106 aa17.35■□□□□ 0.37
FOXA1-204ENST00000554607 SLC25A4P12235 298 aa17.35■□□□□ 0.37
FOXA1-204ENST00000554607 SPCS3P61009 180 aa17.35■□□□□ 0.37
FOXA1-204ENST00000554607 LHFPL1Q86WI0 220 aa17.35■□□□□ 0.37
FOXA1-204ENST00000554607 NRN1Q9NPD7 142 aa17.35■□□□□ 0.37
FOXA1-204ENST00000554607 COPZ2Q9P299 210 aa17.35■□□□□ 0.37
FOXA1-204ENST00000554607 SMIM9A6NGZ8 99 aa17.34■□□□□ 0.37
FOXA1-204ENST00000554607 RNASE10Q5GAN6 216 aaKnown RBP17.34■□□□□ 0.37
FOXA1-204ENST00000554607 UBE2DNLQ8IWF7 75 aa17.34■□□□□ 0.37
FOXA1-204ENST00000554607 ARRDC1Q8N5I2 433 aa17.34■□□□□ 0.37
FOXA1-204ENST00000554607 CCDC71LQ8N9Z2 235 aa17.34■□□□□ 0.37
FOXA1-204ENST00000554607 SCRT1Q9BWW7 348 aa17.34■□□□□ 0.37
FOXA1-204ENST00000554607 ABCA13Q86UQ4 5058 aa17.33■□□□□ 0.37
FOXA1-204ENST00000554607 GSTZ1O43708 216 aaPredicted RBP17.33■□□□□ 0.36
FOXA1-204ENST00000554607 B3GALNT1O75752 331 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 ATP6V1G2O95670 118 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 OR10J1P30954 320 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 RND2P52198 227 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 DHODHQ02127 395 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 SOHLH1Q5JUK2 328 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 PRSS54Q6PEW0 395 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 ZNF705AQ6ZN79 300 aaPredicted RBP17.33■□□□□ 0.36
FOXA1-204ENST00000554607 FAM219AQ8IW50 185 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 OR52E5Q8NH55 327 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 ZFAND1Q8TCF1 268 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 RNASEH2CQ8TDP1 164 aaKnown RBP17.33■□□□□ 0.36
FOXA1-204ENST00000554607 YIPF6Q96EC8 236 aa17.33■□□□□ 0.36
FOXA1-204ENST00000554607 CD74P04233 296 aa17.32■□□□□ 0.36
FOXA1-204ENST00000554607 UCP1P25874 307 aa17.32■□□□□ 0.36
FOXA1-204ENST00000554607 SP6Q3SY56 376 aa17.32■□□□□ 0.36
FOXA1-204ENST00000554607 SIGLEC15Q6ZMC9 328 aa17.32■□□□□ 0.36
FOXA1-204ENST00000554607 HEYLQ9NQ87 328 aaPredicted RBP17.32■□□□□ 0.36
FOXA1-204ENST00000554607 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.32■□□□□ 0.36
FOXA1-204ENST00000554607 TEX48A0A1B0GUV7 120 aa17.31■□□□□ 0.36
FOXA1-204ENST00000554607 IL4P05112 153 aa17.31■□□□□ 0.36
FOXA1-204ENST00000554607 HLA-DRB4P13762 266 aa17.31■□□□□ 0.36
FOXA1-204ENST00000554607 NKX2-1P43699 371 aaPredicted RBP17.31■□□□□ 0.36
FOXA1-204ENST00000554607 AARDQ4LEZ3 155 aa17.31■□□□□ 0.36
FOXA1-204ENST00000554607 C2orf83Q53S99 150 aa17.31■□□□□ 0.36
FOXA1-204ENST00000554607 ETFRF1Q6IPR1 90 aa17.31■□□□□ 0.36
FOXA1-204ENST00000554607 HLA-DRB4X5D2U9 266 aa17.31■□□□□ 0.36
FOXA1-204ENST00000554607 A0A0G2JRQ6 117 aa17.3■□□□□ 0.36
FOXA1-204ENST00000554607 ZNF705FA8MVS1 300 aaPredicted RBP17.3■□□□□ 0.36
FOXA1-204ENST00000554607 BUB3O43684 328 aa17.3■□□□□ 0.36
FOXA1-204ENST00000554607 ZNF705DP0CH99 300 aaPredicted RBP17.3■□□□□ 0.36
FOXA1-204ENST00000554607 ZNF705BP0CI00 300 aaPredicted RBP17.3■□□□□ 0.36
FOXA1-204ENST00000554607 ELK1P19419 428 aa17.3■□□□□ 0.36
FOXA1-204ENST00000554607 TBPP20226 339 aa17.3■□□□□ 0.36
FOXA1-204ENST00000554607 USF2Q15853 346 aaPredicted RBP17.3■□□□□ 0.36
FOXA1-204ENST00000554607 Q6ZRM9 215 aa17.3■□□□□ 0.36
FOXA1-204ENST00000554607 VCX3AQ9NNX9 186 aa17.3■□□□□ 0.36
FOXA1-204ENST00000554607 EMP1P54849 157 aa17.29■□□□□ 0.36
FOXA1-204ENST00000554607 Q6ZR54 194 aa17.29■□□□□ 0.36
FOXA1-204ENST00000554607 KLK11Q9UBX7 282 aa17.29■□□□□ 0.36
FOXA1-204ENST00000554607 RFNGQ9Y644 331 aa17.29■□□□□ 0.36
FOXA1-204ENST00000554607 IGLV2-18A0A075B6J9 118 aa17.28■□□□□ 0.36
FOXA1-204ENST00000554607 CD3DP04234 171 aa17.28■□□□□ 0.36
FOXA1-204ENST00000554607 RD3LP0DJH9 198 aa17.28■□□□□ 0.36
FOXA1-204ENST00000554607 RNF212Q495C1 297 aa17.28■□□□□ 0.36
FOXA1-204ENST00000554607 NOXA1Q86UR1 476 aa17.28■□□□□ 0.36
FOXA1-204ENST00000554607 SLC24A4Q8NFF2 622 aa17.28■□□□□ 0.36
FOXA1-204ENST00000554607 TERB2Q8NHR7 220 aa17.28■□□□□ 0.36
FOXA1-204ENST00000554607 HPGDSO60760 199 aa17.27■□□□□ 0.36
FOXA1-204ENST00000554607 CDS2O95674 445 aa17.27■□□□□ 0.36
FOXA1-204ENST00000554607 TOMM40O96008 361 aa17.27■□□□□ 0.36
FOXA1-204ENST00000554607 NUP62P37198 522 aaPredicted RBP17.27■□□□□ 0.36
FOXA1-204ENST00000554607 NIPSNAP3BQ9BS92 247 aa17.27■□□□□ 0.36
FOXA1-204ENST00000554607 PFDN2Q9UHV9 154 aa17.27■□□□□ 0.36
FOXA1-204ENST00000554607 RNASE12Q5GAN4 147 aaKnown RBP17.26■□□□□ 0.35
FOXA1-204ENST00000554607 OR13C8Q8NGS7 320 aa17.26■□□□□ 0.35
FOXA1-204ENST00000554607 NPIPB3Q92617 1050 aa17.26■□□□□ 0.35
FOXA1-204ENST00000554607 TMEM222Q9H0R3 208 aa17.26■□□□□ 0.35
FOXA1-204ENST00000554607 DKK2Q9UBU2 259 aa17.26■□□□□ 0.35
FOXA1-204ENST00000554607 CACFD1Q9UGQ2 172 aa17.26■□□□□ 0.35
FOXA1-204ENST00000554607 IGHV3OR16-12A0A075B7B8 117 aa17.25■□□□□ 0.35
FOXA1-204ENST00000554607 CEBPZOSA8MTT3 80 aa17.25■□□□□ 0.35
FOXA1-204ENST00000554607 FAM25AB3EWG3 89 aa17.25■□□□□ 0.35
FOXA1-204ENST00000554607 FAM25CB3EWG5 89 aa17.25■□□□□ 0.35
FOXA1-204ENST00000554607 FAM25GB3EWG6 89 aa17.25■□□□□ 0.35
FOXA1-204ENST00000554607 CLUHP3Q96NS8 147 aa17.25■□□□□ 0.35
FOXA1-204ENST00000554607 ABHD1Q96SE0 405 aa17.25■□□□□ 0.35
FOXA1-204ENST00000554607 MTFP1Q9UDX5 166 aa17.25■□□□□ 0.35
FOXA1-204ENST00000554607 ID1P41134 155 aa17.24■□□□□ 0.35
FOXA1-204ENST00000554607 OXA1LQ15070 435 aa17.24■□□□□ 0.35
FOXA1-204ENST00000554607 SCGB2B2Q4G0G5 96 aa17.24■□□□□ 0.35
FOXA1-204ENST00000554607 C1orf134Q5TEV5 83 aa17.24■□□□□ 0.35
FOXA1-204ENST00000554607 FAM222AQ5U5X8 452 aa17.24■□□□□ 0.35
FOXA1-204ENST00000554607 MZT2AQ6P582 158 aa17.24■□□□□ 0.35
FOXA1-204ENST00000554607 OR52I2Q8NH67 350 aa17.24■□□□□ 0.35
FOXA1-204ENST00000554607 RBPMSQ93062 196 aaKnown RBP17.24■□□□□ 0.35
FOXA1-204ENST00000554607 ACY3Q96HD9 319 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms