RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 RRN3P1Q2M238 152 aa8.98□□□□□ -0.97
VPS29-211ENST00000553128 SIGLEC15Q6ZMC9 328 aa8.98□□□□□ -0.97
VPS29-211ENST00000553128 OR4B1Q8NGF8 309 aa8.98□□□□□ -0.97
VPS29-211ENST00000553128 RNF141Q8WVD5 230 aa8.98□□□□□ -0.97
VPS29-211ENST00000553128 FRZBQ92765 325 aa8.98□□□□□ -0.97
VPS29-211ENST00000553128 C7orf50Q9BRJ6 194 aaKnown RBP8.98□□□□□ -0.97
VPS29-211ENST00000553128 WDR12Q9GZL7 423 aaKnown RBP8.98□□□□□ -0.97
VPS29-211ENST00000553128 SAV1Q9H4B6 383 aaPredicted RBP8.98□□□□□ -0.97
VPS29-211ENST00000553128 AUNIPQ9H7T9 357 aa8.98□□□□□ -0.97
VPS29-211ENST00000553128 SEPSECSQ9HD40 501 aaKnown RBP8.98□□□□□ -0.97
VPS29-211ENST00000553128 TPRKBQ9Y3C4 175 aa8.98□□□□□ -0.97
VPS29-211ENST00000553128 GOLT1BQ9Y3E0 138 aa8.98□□□□□ -0.97
VPS29-211ENST00000553128 F6UB75 175 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 GPR31O00270 319 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 PMP2P02689 132 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 DEFB130BP0DP73 79 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 DEFB130AP0DP74 79 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 OPRK1P41145 380 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 DHODHQ02127 395 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 FCN2Q15485 313 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 PRSS48Q7RTY5 328 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 CMTM1Q8IZ96 169 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 BORCS5Q969J3 196 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 LINC00052Q96N35 136 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 UHRF2Q96PU4 802 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 RRP15Q9Y3B9 282 aaKnown RBP8.97□□□□□ -0.97
VPS29-211ENST00000553128 DNAH8Q96JB1 4490 aa8.97□□□□□ -0.97
VPS29-211ENST00000553128 A0A0B4J293 547 aa8.96□□□□□ -0.98
VPS29-211ENST00000553128 BUB3O43684 328 aa8.96□□□□□ -0.98
VPS29-211ENST00000553128 IGLC1P0CG04 106 aa8.96□□□□□ -0.98
VPS29-211ENST00000553128 ALDH3B2P48448 385 aa8.96□□□□□ -0.98
VPS29-211ENST00000553128 ZNF79Q15937 498 aa8.96□□□□□ -0.98
VPS29-211ENST00000553128 SFXN4Q6P4A7 337 aa8.96□□□□□ -0.98
VPS29-211ENST00000553128 FOXI2Q6ZQN5 318 aa8.96□□□□□ -0.98
VPS29-211ENST00000553128 TBC1D26Q86UD7 250 aa8.96□□□□□ -0.98
VPS29-211ENST00000553128 Q9H3A6 140 aa8.96□□□□□ -0.98
VPS29-211ENST00000553128 ZNF705GA8MUZ8 300 aaPredicted RBP8.95□□□□□ -0.98
VPS29-211ENST00000553128 INS-IGF2F8WCM5 200 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 J3QL48 77 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 IGKV1-5P01602 117 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 IL4P05112 153 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 CLEC2LP0C7M8 214 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 ETV6P41212 452 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 RORCP51449 518 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 PSG9Q00887 426 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 FAM78BQ5VT40 261 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 SLC35G3Q8N808 338 aa8.95□□□□□ -0.98
VPS29-211ENST00000553128 TXNL4BQ9NX01 149 aaKnown RBP8.95□□□□□ -0.98
VPS29-211ENST00000553128 PLAC8L1A1L4L8 177 aa8.94□□□□□ -0.98
VPS29-211ENST00000553128 CORTO00230 105 aa8.94□□□□□ -0.98
VPS29-211ENST00000553128 HOXA1P49639 335 aaPredicted RBP8.94□□□□□ -0.98
VPS29-211ENST00000553128 HAMPP81172 84 aa8.94□□□□□ -0.98
VPS29-211ENST00000553128 CLINT1Q14677 625 aa8.94□□□□□ -0.98
VPS29-211ENST00000553128 TBCEQ15813 527 aaPredicted RBP8.94□□□□□ -0.98
VPS29-211ENST00000553128 Q6ZRN7 208 aaPredicted RBP8.94□□□□□ -0.98
VPS29-211ENST00000553128 Q8WTZ3 238 aa8.94□□□□□ -0.98
VPS29-211ENST00000553128 CLUHP3Q96NS8 147 aa8.94□□□□□ -0.98
VPS29-211ENST00000553128 MAGT1Q9H0U3 335 aa8.94□□□□□ -0.98
VPS29-211ENST00000553128 ZNF586Q9NXT0 402 aa8.94□□□□□ -0.98
VPS29-211ENST00000553128 LYRM9A8MSI8 78 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 SOCS3O14543 225 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 NXPH3O95157 252 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 P0C879 139 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 ELK1P19419 428 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 AZU1P20160 251 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 OR10J1P30954 320 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 CBX5P45973 191 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 RPL5P46777 297 aaKnown RBP8.93□□□□□ -0.98
VPS29-211ENST00000553128 RND2P52198 227 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 BSXQ3C1V8 233 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 TTC32Q5I0X7 151 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 PRSS54Q6PEW0 395 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 OR1S2Q8NGQ3 325 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 C17orf77Q96MU5 243 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 SCPEP1Q9HB40 452 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 IFT46Q9NQC8 304 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 FAM212BQ9NTI7 297 aaPredicted RBP8.93□□□□□ -0.98
VPS29-211ENST00000553128 ANAPC10Q9UM13 185 aa8.93□□□□□ -0.98
VPS29-211ENST00000553128 LRP1Q07954 4544 aaKnown RBP8.93□□□□□ -0.98
VPS29-211ENST00000553128 TRAV30A0A087WSZ9 112 aa8.92□□□□□ -0.98
VPS29-211ENST00000553128 M0QYG6 137 aa8.92□□□□□ -0.98
VPS29-211ENST00000553128 SUB1P53999 127 aaKnown RBP eCLIP8.92□□□□□ -0.98
VPS29-211ENST00000553128 LINC00315P59091 139 aa8.92□□□□□ -0.98
VPS29-211ENST00000553128 YPEL3P61236 119 aaPredicted RBP8.92□□□□□ -0.98
VPS29-211ENST00000553128 GPR146Q96CH1 333 aa8.92□□□□□ -0.98
VPS29-211ENST00000553128 C20orf173Q96LM9 149 aa8.92□□□□□ -0.98
VPS29-211ENST00000553128 TMEM208Q9BTX3 173 aa8.92□□□□□ -0.98
VPS29-211ENST00000553128 A0A0J9YX75 114 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 SCGB2A1O75556 95 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 ATP5G1P05496 136 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 SDC2P34741 201 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 ATP5G3P48201 142 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 AQP4P55087 323 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 PAX9P55771 341 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 TAS2R20P59543 309 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 MXD1Q05195 221 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 ESRGQ1W209 222 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 AMTNQ6UX39 209 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 LYSMD2Q8IV50 215 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms