RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 DSCAMO60469 2012 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 K7EP13 123 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 SAA1P0DJI8 122 aaPredicted RBP11.13□□□□□ -0.63
HDAC7-228ENST00000548938 TNFSF4P23510 183 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 GNG5P63218 68 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 MZT1Q08AG7 82 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 ZNF841Q6ZN19 808 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 SGK494Q96LW2 274 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 IGHV2-70DA0A0C4DH43 119 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 CT45A6P0DMU7 189 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 CT45A5P0DMU8 189 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 CT45A7P0DMV0 189 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 FAM120AOSQ5T036 256 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 IGF2-ASQ6U949 168 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 OR1L8Q8NGR8 309 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 RND1Q92730 232 aa11.13□□□□□ -0.63
HDAC7-228ENST00000548938 DSCAML1Q8TD84 2053 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 IGHV3-48P01763 117 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 CD24P25063 80 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 CCL11P51671 97 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 C1orf162Q8NEQ5 155 aaPredicted RBP11.12□□□□□ -0.63
HDAC7-228ENST00000548938 OR2D3Q8NGH3 330 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 PAXXQ9BUH6 204 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 SPTBN2O15020 2390 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 COX7A2P2O60397 106 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 CFHR2P36980 270 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 LINC00173Q6ZV60 143 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 TMEM178AQ8NBL3 297 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 ZNF596Q8TC21 504 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 ZNF714Q96N38 554 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 TMEM70Q9BUB7 260 aa11.12□□□□□ -0.63
HDAC7-228ENST00000548938 A0A1B0GXF2 115 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 OR4C46A6NHA9 309 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 SPRY3O43610 288 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 PLAUP00749 431 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 CA7P43166 264 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 FOXA3P55318 350 aaPredicted RBP11.11□□□□□ -0.63
HDAC7-228ENST00000548938 TCF24Q7RTU0 167 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 FDCSPQ8NFU4 85 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 OR4C5Q8NGB2 326 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 ITLN1Q8WWA0 313 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 PATE2Q6UY27 113 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 NAV3Q8IVL0 2385 aa11.11□□□□□ -0.63
HDAC7-228ENST00000548938 CACNA1GO43497 2377 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 E7EUB6 86 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 HIST1H1EP10412 219 aaKnown RBP11.1□□□□□ -0.63
HDAC7-228ENST00000548938 MPV17L2Q567V2 206 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 C10orf113Q5VZT2 155 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 DEFB108BQ8NET1 73 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 FXYD5Q96DB9 178 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 hDV102S1A0JD36 115 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 DLL1O00548 723 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 LHBP01229 141 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 CDKN1BP46527 198 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 VAMP3Q15836 100 aa11.1□□□□□ -0.63
HDAC7-228ENST00000548938 INTS1Q8N201 2190 aaKnown RBP11.1□□□□□ -0.63
HDAC7-228ENST00000548938 ARFGEF3Q5TH69 2177 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 TANC2Q9HCD6 1990 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 VHLLQ6RSH7 139 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 SSX8Q7RTT4 187 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 FNDC4Q9H6D8 234 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-228ENST00000548938 RAB9BQ9NP90 201 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 RPH3ALQ9UNE2 315 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 ICE1Q9Y2F5 2266 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 IGHV1-24A0A0C4DH33 117 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 ATP5IP56385 69 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-228ENST00000548938 RNF151Q2KHN1 245 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 ATP5L2Q7Z4Y8 100 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 NPIPB3Q92617 1050 aa11.09□□□□□ -0.63
HDAC7-228ENST00000548938 HBBP68871 147 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 LINC00322Q6ZN03 302 aaPredicted RBP11.08□□□□□ -0.64
HDAC7-228ENST00000548938 SLC25A48Q6ZT89 311 aaKnown RBP11.08□□□□□ -0.64
HDAC7-228ENST00000548938 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 FAM216BQ8N7L0 139 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 CACNG8Q8WXS5 425 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 HARBI1Q96MB7 349 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.64
HDAC7-228ENST00000548938 NDUFA4L2Q9NRX3 87 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 AKAP13Q12802 2813 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 FSTL3O95633 263 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 C10orf55Q5SWW7 151 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 CHRDL1Q9BU40 450 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 MRPL20Q9BYC9 149 aaKnown RBP11.08□□□□□ -0.64
HDAC7-228ENST00000548938 ZNF430Q9H8G1 570 aaPredicted RBP11.08□□□□□ -0.64
HDAC7-228ENST00000548938 MRPL36Q9P0J6 103 aaKnown RBP11.08□□□□□ -0.64
HDAC7-228ENST00000548938 IGKV1D-37A0A075B6S9 117 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 SYS1-DBNDD2H3BUS1 97 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 IGHG3P01860 377 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 LRRC10Q5BKY1 277 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 BLNKQ8WV28 456 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 CCL13Q99616 98 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 ST20Q9HBF5 79 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 RPUSD1Q9UJJ7 312 aaKnown RBP11.08□□□□□ -0.64
HDAC7-228ENST00000548938 WASHC3Q9Y3C0 194 aa11.08□□□□□ -0.64
HDAC7-228ENST00000548938 SVILO95425 2214 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 TAX1BP3O14907 124 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
HDAC7-228ENST00000548938 SLC25A5P05141 298 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms