RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 SLC25A4P12235 298 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 P2RY1P47900 373 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 TMBIM6P55061 237 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 LEMD1Q68G75 181 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 STHQ8IWL8 128 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 OR51S1Q8NGJ8 323 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 OR1S2Q8NGQ3 325 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 OR11H2Q8NH07 326 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 RNASEH2CQ8TDP1 164 aaKnown RBP10.53□□□□□ -0.72
COL2A1-209ENST00000546974 PHLDA1Q8WV24 401 aaPredicted RBP10.53□□□□□ -0.72
COL2A1-209ENST00000546974 IL22RA2Q969J5 263 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 C11orf68Q9H3H3 251 aaKnown RBP10.53□□□□□ -0.72
COL2A1-209ENST00000546974 KCNIP3Q9Y2W7 256 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 CEBPZOSA8MTT3 80 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 K7EQG2 157 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 IGLC1P0CG04 106 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 YPEL3P61236 119 aaPredicted RBP10.52□□□□□ -0.73
COL2A1-209ENST00000546974 TMEM187Q14656 261 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 PRSS54Q6PEW0 395 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 NOXA1Q86UR1 476 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 SLC24A4Q8NFF2 622 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 STXBP6Q8NFX7 210 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 Q8WTZ3 238 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 GRAMD2BQ96HH9 432 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 SCGB3A2Q96PL1 93 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 RSL24D1Q9UHA3 163 aaKnown RBP10.52□□□□□ -0.73
COL2A1-209ENST00000546974 SCP2D1Q9UJQ7 156 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 U3KQE9 123 aa10.52□□□□□ -0.73
COL2A1-209ENST00000546974 SULT1A3P0DMM9 295 aa10.51□□□□□ -0.73
COL2A1-209ENST00000546974 SULT1A4P0DMN0 295 aa10.51□□□□□ -0.73
COL2A1-209ENST00000546974 OR10J1P30954 320 aa10.51□□□□□ -0.73
COL2A1-209ENST00000546974 EIF2B2P49770 351 aaKnown RBP10.51□□□□□ -0.73
COL2A1-209ENST00000546974 RND2P52198 227 aa10.51□□□□□ -0.73
COL2A1-209ENST00000546974 RBMS2Q15434 407 aaKnown RBP10.51□□□□□ -0.73
COL2A1-209ENST00000546974 NMSQ5H8A3 153 aa10.51□□□□□ -0.73
COL2A1-209ENST00000546974 ETFRF1Q6IPR1 90 aa10.51□□□□□ -0.73
COL2A1-209ENST00000546974 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
COL2A1-209ENST00000546974 MFFQ9GZY8 342 aa10.51□□□□□ -0.73
COL2A1-209ENST00000546974 HNRNPCP07910 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
COL2A1-209ENST00000546974 NPY1RP25929 384 aa10.5□□□□□ -0.73
COL2A1-209ENST00000546974 TMEM41BQ5BJD5 291 aa10.5□□□□□ -0.73
COL2A1-209ENST00000546974 C16orf54Q6UWD8 224 aa10.5□□□□□ -0.73
COL2A1-209ENST00000546974 TRPT1Q86TN4 253 aaKnown RBP10.5□□□□□ -0.73
COL2A1-209ENST00000546974 C11orf45Q8TAV5 145 aa10.5□□□□□ -0.73
COL2A1-209ENST00000546974 TMEM170AQ8WVE7 144 aa10.5□□□□□ -0.73
COL2A1-209ENST00000546974 SOSTQ9BQB4 213 aa10.5□□□□□ -0.73
COL2A1-209ENST00000546974 SLIRPQ9GZT3 109 aaKnown RBP10.5□□□□□ -0.73
COL2A1-209ENST00000546974 U3KQ87 197 aa10.5□□□□□ -0.73
COL2A1-209ENST00000546974 A0A0B4J2A0 478 aa10.49□□□□□ -0.73
COL2A1-209ENST00000546974 HELTA6NFD8 242 aa10.49□□□□□ -0.73
COL2A1-209ENST00000546974 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
COL2A1-209ENST00000546974 SPP1P10451 314 aa10.49□□□□□ -0.73
COL2A1-209ENST00000546974 CCR6P51684 374 aa10.49□□□□□ -0.73
COL2A1-209ENST00000546974 AP2S1P53680 142 aaPredicted RBP10.49□□□□□ -0.73
COL2A1-209ENST00000546974 NANOS2P60321 138 aaKnown RBP10.49□□□□□ -0.73
COL2A1-209ENST00000546974 MORN3Q6PF18 240 aaPredicted RBP10.49□□□□□ -0.73
COL2A1-209ENST00000546974 GLMPQ8WWB7 406 aa10.49□□□□□ -0.73
COL2A1-209ENST00000546974 SHPKQ9UHJ6 478 aa10.49□□□□□ -0.73
COL2A1-209ENST00000546974 FABP12A6NFH5 140 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 NOL3O60936 208 aaKnown RBP10.48□□□□□ -0.73
COL2A1-209ENST00000546974 NXPH3O95157 252 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 TOMM40O96008 361 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 IFNA4P05014 189 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 IL4P05112 153 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 GIG44P09565 113 aaPredicted RBP10.48□□□□□ -0.73
COL2A1-209ENST00000546974 TNFSF8P32971 234 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 SUPT4H1P63272 117 aaKnown RBP10.48□□□□□ -0.73
COL2A1-209ENST00000546974 SMCO1Q147U7 214 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 LGALS9CQ6DKI2 356 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 NPIPB3Q92617 1050 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 MCUBQ9NWR8 336 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 PRR13Q9NZ81 148 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 HSPB7Q9UBY9 170 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 HECTD4Q9Y4D8 3996 aa10.48□□□□□ -0.73
COL2A1-209ENST00000546974 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 IFNA10P01566 189 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 ANXA3P12429 323 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 AKR1C4P17516 323 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 SRPXP78539 464 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 DHRS2Q13268 280 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 USF2Q15853 346 aaPredicted RBP10.47□□□□□ -0.73
COL2A1-209ENST00000546974 LYZL2Q7Z4W2 148 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 LGI3Q8N145 548 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 Q8NAQ8 132 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 DTD1Q8TEA8 209 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 SEPSECSQ9HD40 501 aaKnown RBP10.47□□□□□ -0.73
COL2A1-209ENST00000546974 FBXL17Q9UF56 701 aa10.47□□□□□ -0.73
COL2A1-209ENST00000546974 PIGBOS1A0A0B4J2F0 54 aa10.46□□□□□ -0.73
COL2A1-209ENST00000546974 H3BMQ9 156 aa10.46□□□□□ -0.73
COL2A1-209ENST00000546974 DEFB4AO15263 64 aa10.46□□□□□ -0.73
COL2A1-209ENST00000546974 BUB3O43684 328 aa10.46□□□□□ -0.73
COL2A1-209ENST00000546974 RD3LP0DJH9 198 aa10.46□□□□□ -0.73
COL2A1-209ENST00000546974 ATP5IP56385 69 aaPredicted RBP10.46□□□□□ -0.73
COL2A1-209ENST00000546974 MCFD2Q8NI22 146 aa10.46□□□□□ -0.73
COL2A1-209ENST00000546974 ACY3Q96HD9 319 aa10.46□□□□□ -0.73
COL2A1-209ENST00000546974 HRH4Q9H3N8 390 aa10.46□□□□□ -0.73
COL2A1-209ENST00000546974 RBKSQ9H477 322 aa10.46□□□□□ -0.73
COL2A1-209ENST00000546974 DUXBA0A1W2PPF3 345 aa10.45□□□□□ -0.74
COL2A1-209ENST00000546974 ZNF705EA8MWA4 302 aaPredicted RBP10.45□□□□□ -0.74
COL2A1-209ENST00000546974 PSG1P11464 419 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms