RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CCDC32Q9BV29 185 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 FBXL15Q9H469 300 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 PLEKHJ1Q9NW61 149 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 RASL12Q9NYN1 266 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 CPAMD8Q8IZJ3 1885 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 EML6Q6ZMW3 1958 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 PKD1L1Q8TDX9 2849 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 IGKV2D-24A0A075B6R9 120 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 TRAV8-3A0A0A6YYJ7 113 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 TGIF2-C20orf24A0A0A6YYL0 155 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 TMEM218A2RU14 115 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 BTNL10A8MVZ5 291 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 TRAPPC2LH3BP13 241 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 PDCD5O14737 125 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 SSNA1O43805 119 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 ORC5O43913 435 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 HPGDSO60760 199 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 SOX14O95416 240 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 MT-CO2P00403 227 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 HLA-AP01891 365 aaKnown RBP2.67□□□□□ -1.98
SNHG1-217ENST00000541578 CD74P04233 296 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 CRYBA1P05813 215 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 SOD3P08294 240 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 LINC00869P0C866 280 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 ZNF35P13682 527 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 GZMHP20718 246 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 FGF7P21781 194 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 IMPA1P29218 277 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 COILP38432 576 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-217ENST00000541578 MAXP61244 160 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 RRAS2P62070 204 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-217ENST00000541578 FABP9Q0Z7S8 132 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 TMEM176BQ3YBM2 270 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-217ENST00000541578 PDZD11Q5EBL8 140 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 HIST2H3PS2Q5TEC6 136 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 FAM131AQ6UXB0 335 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 NAA40Q86UY6 237 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 DOLPP1Q86YN1 238 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 BPIFB6Q8NFQ5 453 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 OR4P4Q8NGL7 312 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 CIRBP-AS1Q8TBR5 109 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 C10orf82Q8WW14 230 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 PTH2Q96A98 100 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 LINC00167Q96N53 147 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 LINC01587Q99440 93 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 GPR22Q99680 433 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 ZNF649Q9BS31 505 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 FAM96AQ9H5X1 160 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 SCN3BQ9NY72 215 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 KLF13Q9Y2Y9 288 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-217ENST00000541578 RBM7Q9Y580 266 aaKnown RBP2.67□□□□□ -1.98
SNHG1-217ENST00000541578 PCYT1BQ9Y5K3 369 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-217ENST00000541578 V9GYS6 101 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 DYSFO75923 2080 aa2.67□□□□□ -1.98
SNHG1-217ENST00000541578 F6UZH7 168 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 C19orf84I3L1E1 186 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 J3QLI3 93 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 LGALS9O00182 355 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 UPK1AO00322 258 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 FAAHO00519 579 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 EDF1O60869 148 aaKnown RBP2.66□□□□□ -1.98
SNHG1-217ENST00000541578 PDCD6O75340 191 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 APOC3P02656 99 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 C1QCP02747 245 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 SERPINA7P05543 415 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 CD2P06729 351 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 SEC11BP0C7V7 166 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 S100GP29377 79 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 SPINT3P49223 89 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 ZNF83P51522 516 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 TPI1P60174 286 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 RSU1Q15404 277 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 TSNQ15631 228 aaKnown RBP2.66□□□□□ -1.98
SNHG1-217ENST00000541578 PLPPR5Q32ZL2 321 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 SCGB2B2Q4G0G5 96 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 LINC00483Q53H64 154 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 OCIAD2Q56VL3 154 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 PYY3Q5JQD4 70 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 TIMM23BQ5SRD1 257 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 NCMAPQ5T1S8 102 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 AKR1C8PQ5T2L2 129 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 SMARCD3Q6STE5 483 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 PRNTQ86SH4 94 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 CPNE9Q8IYJ1 553 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 TMEM251Q8N6I4 163 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 YIPF7Q8N8F6 280 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 OR4E2Q8NGC2 313 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 OR10X1Q8NGY0 326 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 OR10A6Q8NH74 314 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 FAM57AQ8TBR7 257 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 CCL17Q92583 94 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 MALSU1Q96EH3 234 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 WDR34Q96EX3 536 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 LINC00477Q96M19 166 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 LYSMD1Q96S90 227 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 THTPAQ9BU02 230 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 SNHG12Q9BXW3 62 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 CHST5Q9GZS9 411 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 TLNRD1Q9H1K6 362 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms