RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 RPS10-NUDT3A0A1W2PQS6 291 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 CENPXA8MT69 81 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 LYRM1O43325 122 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 SLC25A6P12236 298 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 FAM90A2PQ658T7 463 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 LYG2Q86SG7 212 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 NPIPB3Q92617 1050 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 ACY3Q96HD9 319 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 SPAG8Q99932 426 aaPredicted RBP9.81□□□□□ -0.84
PRKDC-206ENST00000536429 ZMAT4Q9H898 229 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 CACFD1Q9UGQ2 172 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 U3KQ87 197 aa9.81□□□□□ -0.84
PRKDC-206ENST00000536429 SACSQ9NZJ4 4579 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 SLC25A4P12235 298 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 OR10J1P30954 320 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 TFPI2P48307 235 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 ODF3L2Q3SX64 289 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 C4orf46Q504U0 113 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 LAMTOR1Q6IAA8 161 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 GINS3Q9BRX5 216 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 C20orf85Q9H1P6 137 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 VSIRQ9H7M9 311 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 TBC1D24Q9ULP9 559 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 CSMD3Q7Z407 3707 aa9.8□□□□□ -0.84
PRKDC-206ENST00000536429 IFNA4P05014 189 aa9.79□□□□□ -0.84
PRKDC-206ENST00000536429 TCF24Q7RTU0 167 aa9.79□□□□□ -0.84
PRKDC-206ENST00000536429 GBGT1Q8N5D6 347 aa9.79□□□□□ -0.84
PRKDC-206ENST00000536429 OR1S2Q8NGQ3 325 aa9.79□□□□□ -0.84
PRKDC-206ENST00000536429 CCDC32Q9BV29 185 aa9.79□□□□□ -0.84
PRKDC-206ENST00000536429 TRAV6A0A075B6T7 132 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 TRAV30A0A087WSZ9 112 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 PIGBOS1A0A0B4J2F0 54 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 FAM90A26D6RGX4 464 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 WRBO00258 174 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 DFFBO76075 338 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 TCRBP04435 133 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 GAMTQ14353 236 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 ZNF124Q15973 351 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 NOXA1Q86UR1 476 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 COQ8AQ8NI60 647 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 FAM110AQ9BQ89 295 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 SPATA25Q9BR10 227 aa9.78□□□□□ -0.84
PRKDC-206ENST00000536429 PAIP2BQ9ULR5 123 aaKnown RBP9.78□□□□□ -0.84
PRKDC-206ENST00000536429 IGKV1D-37A0A075B6S9 117 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 OR4C46A6NHA9 309 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 H3BP45 60 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 SYNGR2O43760 224 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 NPPCP23582 126 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 CRYBB3P26998 211 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 YPEL3P61236 119 aaPredicted RBP9.77□□□□□ -0.85
PRKDC-206ENST00000536429 POLR2GP62487 172 aaKnown RBP eCLIP9.77□□□□□ -0.85
PRKDC-206ENST00000536429 USF2Q15853 346 aaPredicted RBP9.77□□□□□ -0.85
PRKDC-206ENST00000536429 ETFRF1Q6IPR1 90 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 LINC00299Q6ZSB3 139 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 WFDC3Q8IUB2 231 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 FAM24BQ8N5W8 94 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 OR4D5Q8NGN0 318 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 MITD1Q8WV92 249 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 METTL26Q96S19 204 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 SEC22CQ9BRL7 303 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 NUDT15Q9NV35 164 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 PTTG2Q9NZH5 202 aa9.77□□□□□ -0.85
PRKDC-206ENST00000536429 PLECQ15149 4684 aaKnown RBP9.77□□□□□ -0.85
PRKDC-206ENST00000536429 PRSS46E5RG02 174 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 MED6O75586 246 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 IL4P05112 153 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 PSG1P11464 419 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 GPX4P36969 197 aaPredicted RBP9.76□□□□□ -0.85
PRKDC-206ENST00000536429 IFITM3Q01628 133 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 ID3Q02535 119 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 ZNF90Q03938 601 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 APRG1Q8IVJ8 170 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 Q8WTZ3 238 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 S100ZQ8WXG8 99 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 GGTLC1Q9BX51 225 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 MS4A6AQ9H2W1 248 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 U3KQE9 123 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 RYR2Q92736 4967 aa9.76□□□□□ -0.85
PRKDC-206ENST00000536429 IGKV1OR2-108A0A075B7D4 117 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 LOC102724200A0A096LPH7 203 aaPredicted RBP9.75□□□□□ -0.85
PRKDC-206ENST00000536429 CCSO14618 274 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 SCGB2A1O75556 95 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 TOMM40O96008 361 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 RD3LP0DJH9 198 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 NKX2-1P43699 371 aaPredicted RBP9.75□□□□□ -0.85
PRKDC-206ENST00000536429 P2RY1P47900 373 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 ATP5IP56385 69 aaPredicted RBP9.75□□□□□ -0.85
PRKDC-206ENST00000536429 RAB11AP62491 216 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 SPANXN5Q5MJ07 72 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 SLC35E1Q96K37 410 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 CIB3Q96Q77 187 aaPredicted RBP9.75□□□□□ -0.85
PRKDC-206ENST00000536429 LYSTQ99698 3801 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 MAP6D1Q9H9H5 199 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 EDA2RQ9HAV5 297 aa9.75□□□□□ -0.85
PRKDC-206ENST00000536429 SSSCA1O60232 199 aa9.74□□□□□ -0.85
PRKDC-206ENST00000536429 CCNKO75909 580 aa9.74□□□□□ -0.85
PRKDC-206ENST00000536429 SCGB1D2O95969 90 aa9.74□□□□□ -0.85
PRKDC-206ENST00000536429 IFNA21P01568 189 aa9.74□□□□□ -0.85
PRKDC-206ENST00000536429 RPL35AP18077 110 aaKnown RBP9.74□□□□□ -0.85
PRKDC-206ENST00000536429 BMI1P35226 326 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms