RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CCDC94Q9BW85 323 aaPredicted RBP1.37□□□□□ -2.19
PRKDC-205ENST00000535375 RTTNQ86VV8 2226 aa1.37□□□□□ -2.19
PRKDC-205ENST00000535375 CEP350Q5VT06 3117 aa1.37□□□□□ -2.19
PRKDC-205ENST00000535375 OR2T1O43869 369 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 MRPS14O60783 128 aaKnown RBP1.36□□□□□ -2.19
PRKDC-205ENST00000535375 OR4E1P0C645 316 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 MIFP14174 115 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 RNASE4P34096 147 aaKnown RBP1.36□□□□□ -2.19
PRKDC-205ENST00000535375 MAGEA12P43365 314 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 DEFA3P59666 94 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 MED1Q15648 1581 aaPredicted RBP1.36□□□□□ -2.19
PRKDC-205ENST00000535375 KHDC3LQ587J8 217 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 HACD4Q5VWC8 232 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 FMN1Q68DA7 1419 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 DPPA3Q6W0C5 159 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 DOCK3Q8IZD9 2030 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 Q8N2B8 174 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 OR4E2Q8NGC2 313 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 MRPL32Q9BYC8 188 aaKnown RBP1.36□□□□□ -2.19
PRKDC-205ENST00000535375 EPDR1Q9UM22 224 aa1.36□□□□□ -2.19
PRKDC-205ENST00000535375 COL4A5P29400 1685 aa1.35□□□□□ -2.19
PRKDC-205ENST00000535375 ZNF106Q9H2Y7 1883 aaKnown RBP1.35□□□□□ -2.19
PRKDC-205ENST00000535375 A0A087X0T9 212 aa1.35□□□□□ -2.19
PRKDC-205ENST00000535375 OR5F1O95221 314 aa1.35□□□□□ -2.19
PRKDC-205ENST00000535375 UBBP0CG47 229 aa1.35□□□□□ -2.19
PRKDC-205ENST00000535375 RNASE3P12724 160 aaKnown RBP1.35□□□□□ -2.19
PRKDC-205ENST00000535375 SPI1P17947 270 aa1.35□□□□□ -2.19
PRKDC-205ENST00000535375 ATP5G3P48201 142 aa1.35□□□□□ -2.19
PRKDC-205ENST00000535375 PIGPP57054 158 aa1.35□□□□□ -2.19
PRKDC-205ENST00000535375 OR13D1Q8NGV5 346 aa1.35□□□□□ -2.19
PRKDC-205ENST00000535375 PHB2Q99623 299 aa1.35□□□□□ -2.19
PRKDC-205ENST00000535375 COL6A3P12111 3177 aa1.35□□□□□ -2.19
PRKDC-205ENST00000535375 C7orf71A4D174 169 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 TMEM212A6NML5 194 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 CLDN25C9JDP6 229 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 ANGP03950 147 aaKnown RBP1.34□□□□□ -2.19
PRKDC-205ENST00000535375 TSNQ15631 228 aaKnown RBP1.34□□□□□ -2.19
PRKDC-205ENST00000535375 RRN3P1Q2M238 152 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 SPANXN5Q5MJ07 72 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 LYG2Q86SG7 212 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 OR8D4Q8NGM9 314 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 AQP3Q92482 292 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 SLAMF6Q96DU3 332 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 TAS2R4Q9NYW5 299 aa1.34□□□□□ -2.19
PRKDC-205ENST00000535375 BRWD1Q9NSI6 2320 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 FUOMA2VDF0 154 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 KRR1Q13601 381 aaKnown RBP1.33□□□□□ -2.2
PRKDC-205ENST00000535375 PDE6HQ13956 83 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 C10orf55Q5SWW7 151 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 C3orf56Q8N813 242 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 FAM172AQ8WUF8 416 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 AP3S1Q92572 193 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 CEP19Q96LK0 163 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 HIST1H2BLQ99880 126 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 PRRT1Q99946 306 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 SLC50A1Q9BRV3 221 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 ADAT1Q9BUB4 502 aaKnown RBP1.33□□□□□ -2.2
PRKDC-205ENST00000535375 IMUPQ9GZP8 106 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 MED9Q9NWA0 146 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 STOML2Q9UJZ1 356 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 PYCARDQ9ULZ3 195 aa1.33□□□□□ -2.2
PRKDC-205ENST00000535375 SETXQ7Z333 2677 aaKnown RBP1.32□□□□□ -2.2
PRKDC-205ENST00000535375 C1orf196B1AJZ1 125 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 TMEM238C9JI98 176 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 HMGB3O15347 200 aaKnown RBP1.32□□□□□ -2.2
PRKDC-205ENST00000535375 CYB5BO43169 146 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 ASAH2BP0C7U1 165 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 BAALC-AS2P0C853 105 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 LYRM7Q5U5X0 104 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 RPS19BP1Q86WX3 136 aaKnown RBP1.32□□□□□ -2.2
PRKDC-205ENST00000535375 C15orf53Q8NAA6 179 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 STAG3L4Q8TBR4 150 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 TMEM126AQ9H061 195 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 NHP2Q9NX24 153 aaKnown RBP1.32□□□□□ -2.2
PRKDC-205ENST00000535375 PRNDQ9UKY0 176 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 HS3ST2Q9Y278 367 aa1.32□□□□□ -2.2
PRKDC-205ENST00000535375 SOX21Q9Y651 276 aaPredicted RBP1.32□□□□□ -2.2
PRKDC-205ENST00000535375 BAZ2BQ9UIF8 2168 aaKnown RBP1.32□□□□□ -2.2
PRKDC-205ENST00000535375 CCDC88AQ3V6T2 1871 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 SDK1Q7Z5N4 2213 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 PLXND1Q9Y4D7 1925 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 MYH11P35749 1972 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 C2orf70A6NJV1 201 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 IFNA7P01567 189 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 S100A5P33763 92 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 PHF13Q86YI8 300 aaPredicted RBP1.31□□□□□ -2.2
PRKDC-205ENST00000535375 EXOC3-AS1Q8N2X6 119 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 OR10J5Q8NHC4 309 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 KIF1BO60333 1816 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 MIA2Q96PC5 1412 aa1.31□□□□□ -2.2
PRKDC-205ENST00000535375 SCN10AQ9Y5Y9 1956 aa1.3□□□□□ -2.2
PRKDC-205ENST00000535375 TRAV1-1A0A0B4J248 108 aa1.3□□□□□ -2.2
PRKDC-205ENST00000535375 M0R378 163 aa1.3□□□□□ -2.2
PRKDC-205ENST00000535375 ATG12O94817 140 aa1.3□□□□□ -2.2
PRKDC-205ENST00000535375 PPP1R2P41236 205 aa1.3□□□□□ -2.2
PRKDC-205ENST00000535375 SSR2P43308 183 aa1.3□□□□□ -2.2
PRKDC-205ENST00000535375 NCALDP61601 193 aa1.3□□□□□ -2.2
PRKDC-205ENST00000535375 RPL19P84098 196 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms