RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	PRTN3	P24158	256 aa		12.97	□□□□□ -0.33
NCAPD3-213	ENST00000534532	BUB1B-PAK6	H3BSN5	160 aa		12.97	□□□□□ -0.33
NCAPD3-213	ENST00000534532	TMEM42	Q69YG0	159 aa		12.97	□□□□□ -0.33
NCAPD3-213	ENST00000534532	TRBV7-1	A0A0A6YYK4	115 aa		12.96	□□□□□ -0.33
NCAPD3-213	ENST00000534532	LOC107984156	A0A0G2JMH3	177 aa		12.96	□□□□□ -0.33
NCAPD3-213	ENST00000534532	ATP5L	O75964	103 aa		12.96	□□□□□ -0.33
NCAPD3-213	ENST00000534532	ARL17A	Q8IVW1	177 aa		12.96	□□□□□ -0.33
NCAPD3-213	ENST00000534532	OR11H12	B2RN74	326 aa		12.96	□□□□□ -0.33
NCAPD3-213	ENST00000534532	DTX1	Q86Y01	620 aa		12.96	□□□□□ -0.33
NCAPD3-213	ENST00000534532	OR11H1	Q8NG94	326 aa		12.96	□□□□□ -0.33
NCAPD3-213	ENST00000534532	OR11H2	Q8NH07	326 aa		12.96	□□□□□ -0.33
NCAPD3-213	ENST00000534532	SCGB3A1	Q96QR1	104 aa		12.96	□□□□□ -0.33
NCAPD3-213	ENST00000534532		A0A087X0M5	115 aa		12.96	□□□□□ -0.34
NCAPD3-213	ENST00000534532	MUC21	A0A0G2JKD1	596 aa		12.96	□□□□□ -0.34
NCAPD3-213	ENST00000534532	MUC21	A0A140T8X8	626 aa		12.96	□□□□□ -0.34
NCAPD3-213	ENST00000534532		A0A1B0GX30	115 aa		12.96	□□□□□ -0.34
NCAPD3-213	ENST00000534532	SCO2	A0A1W2PP80	73 aa		12.96	□□□□□ -0.34
NCAPD3-213	ENST00000534532	C1QTNF4	Q9BXJ3	329 aa		12.96	□□□□□ -0.34
NCAPD3-213	ENST00000534532	DNLZ	Q5SXM8	178 aa		12.95	□□□□□ -0.34
NCAPD3-213	ENST00000534532	LY6G6E	A0A0G2JKS1	128 aa		12.95	□□□□□ -0.34
NCAPD3-213	ENST00000534532	SAA4	P35542	130 aa		12.95	□□□□□ -0.34
NCAPD3-213	ENST00000534532	FBLN7	Q53RD9	439 aa		12.95	□□□□□ -0.34
NCAPD3-213	ENST00000534532	IFT22	Q9H7X7	185 aa		12.95	□□□□□ -0.34
NCAPD3-213	ENST00000534532		U3KQA8	63 aa		12.95	□□□□□ -0.34
NCAPD3-213	ENST00000534532	OR10J3	Q5JRS4	329 aa		12.95	□□□□□ -0.34
NCAPD3-213	ENST00000534532	PUSL1	Q8N0Z8	303 aa	Known RBP	12.95	□□□□□ -0.34
NCAPD3-213	ENST00000534532	ZNF25	P17030	456 aa	Predicted RBP	12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	FOXA3	P55318	350 aa	Predicted RBP	12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	OR9G4	Q8NGQ1	327 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	SMIM6	P0DI80	62 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	OR10W1	Q8NGF6	305 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	C10orf55	Q5SWW7	151 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	IL36B	Q9NZH7	164 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	DNAL4	O96015	105 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	GCSAML	Q5JQS6	135 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	ZNF329	Q86UD4	541 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	ST20	Q9HBF5	79 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532	EPDR1	Q9UM22	224 aa		12.94	□□□□□ -0.34
NCAPD3-213	ENST00000534532		A0A1B0GWJ7	208 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	CDX1	P47902	265 aa	Predicted RBP	12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	ATP5G3	P48201	142 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	ZNF414	Q96IQ9	312 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	PRADC1	Q9BSG0	188 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	FAM223B	A6NKX1	122 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	CEACAM8	P31997	349 aa	Predicted RBP	12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	ZNF415	Q09FC8	603 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532		Q5BKY6	102 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	FAM223A	Q8IWN6	122 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	PSG8	Q9UQ74	426 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	TMEM50A	O95807	157 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	CACNG7	P62955	275 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	BIVM	Q86UB2	503 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	TMEM160	Q9NX00	188 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	HGFAC	Q04756	655 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	LYPD2	Q6UXB3	125 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	ORMDL3	Q8N138	153 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	TMEM190	Q8WZ59	177 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532		A0A1W2PRE2	83 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532		J3QRE1	110 aa		12.93	□□□□□ -0.34
NCAPD3-213	ENST00000534532	IGKV1-27	A0A075B6S5	117 aa		12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532	CNTFR	P26992	372 aa		12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532	CR1L	Q2VPA4	569 aa		12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532	HOXA5	P20719	270 aa		12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532	ARL6IP6	Q8N6S5	226 aa		12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532	TCF20	Q9UGU0	1960 aa	Known RBP	12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532	ID3	Q02535	119 aa		12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532	CHCHD5	Q9BSY4	110 aa		12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532	PNRC2	Q9NPJ4	139 aa	Known RBP	12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532		A0A087WV48	116 aa		12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532		H0YJW9	148 aa		12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532	UBE2E1	P51965	193 aa		12.92	□□□□□ -0.34
NCAPD3-213	ENST00000534532	NYNRIN	Q9P2P1	1898 aa	Known RBP	12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532		A0A0A6YYD4	124 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	SLC25A34	Q6PIV7	304 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	IGKV1D-17	A0A075B6S4	117 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	MPTX1	A8MV57	137 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	IFI27	P40305	119 aa	Predicted RBP	12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	GNG5	P63218	68 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	SPATA45	Q537H7	98 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	C18orf15	Q96N68	181 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	KLHDC3	Q9BQ90	382 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532		A0A087WX48	190 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532		J3QLI3	93 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	PYY	P10082	97 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	RPL35A	P18077	110 aa	Known RBP	12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	MAPK1IP1L	Q8NDC0	245 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	APOH	P02749	345 aa	Predicted RBP	12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	CBLN1	P23435	193 aa		12.91	□□□□□ -0.34
NCAPD3-213	ENST00000534532	SLC17A3	O00476	420 aa		12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	ZNF688	P0C7X2	276 aa		12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	OTX1	P32242	354 aa	Predicted RBP	12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	PKIA	P61925	76 aa		12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	C9orf139	Q6ZV77	190 aa		12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	WDR83OS	Q9Y284	106 aa		12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	PEF1	Q9UBV8	284 aa	Known RBP	12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	MED12	Q93074	2177 aa		12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	RPRML	Q8N4K4	120 aa		12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	VCX2	Q9H322	139 aa		12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	KIF26B	Q2KJY2	2108 aa		12.9	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms