RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 TTC32Q5I0X7 151 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 TRAV40A0A0B4J280 105 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 NSUN5P1Q3KNT7 163 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 RNF166Q96A37 237 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-225ENST00000530094 RNF114Q9Y508 228 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 F11RQ9Y624 299 aaKnown RBP7.02□□□□□ -1.29
CTNND1-225ENST00000530094 TRBV7-1A0A0A6YYK4 115 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 TRBV7-9A0A0J9YWB2 115 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 TIMM23O14925 209 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 EMP1P54849 157 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 NXT2Q9NPJ8 142 aaKnown RBP7.02□□□□□ -1.29
CTNND1-225ENST00000530094 SCO2A0A1W2PP80 73 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 LINC00587B1AMM8 73 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 TMEM50AO95807 157 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 CCL20P78556 96 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 VMO1Q7Z5L0 202 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 FAM169BQ8N8A8 192 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 USMG5Q96IX5 58 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 FOXC2Q99958 501 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 PEF1Q9UBV8 284 aaKnown RBP7.02□□□□□ -1.29
CTNND1-225ENST00000530094 S4R3C0 116 aa7.02□□□□□ -1.29
CTNND1-225ENST00000530094 FANCMQ8IYD8 2048 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 DPRXA6NFQ7 191 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 TCF21O43680 179 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 NAT1P18440 290 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 GATA3P23771 443 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 SSC4DQ8WTU2 575 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 C1QTNF4Q9BXJ3 329 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 EPDR1Q9UM22 224 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 PCNX1Q96RV3 2341 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 A0A0G2JNJ9 132 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 ERVH48-1M5A8F1 160 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 TPTE2P1Q5T6R2 138 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 FAM71F2Q6NXP2 309 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 FAM89BQ8N5H3 189 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 DMRTA2Q96SC8 542 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 MRPL16Q9NX20 251 aaKnown RBP7.01□□□□□ -1.29
CTNND1-225ENST00000530094 PGPEP1Q9NXJ5 209 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 Q9UFV3 132 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 IGHV2-26A0A0B4J1V2 119 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 FAM223BA6NKX1 122 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 ZNF815PA8K554 130 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 LYNX1G3V0Z9 82 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 EFNA2O43921 213 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 LYNX1P0DP58 116 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 FOXG1P55316 489 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-225ENST00000530094 ERVK11-1P61568 191 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 GGNQ86UU5 652 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 FAM223AQ8IWN6 122 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 LINC01356Q8N9X3 169 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 WFIKKN1Q96NZ8 548 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 CARHSP1Q9Y2V2 147 aaKnown RBP7.01□□□□□ -1.29
CTNND1-225ENST00000530094 SRRM5B3KS81 715 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 TOMM7Q9P0U1 55 aa7.01□□□□□ -1.29
CTNND1-225ENST00000530094 CLPSP04118 112 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 CRYGSP22914 178 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 DUTP33316 252 aaKnown RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 ZNF324BQ6AW86 544 aaPredicted RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 HEPN1Q6WQI6 88 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 ARL6IP6Q8N6S5 226 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 LYZL4Q96KX0 146 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 RPUSD1Q9UJJ7 312 aaKnown RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 CYSLTR1Q9Y271 337 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 SRP19P09132 144 aaKnown RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 EFNB1P98172 346 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 OR9G4Q8NGQ1 327 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 OSTCQ9NRP0 149 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 TMEM178BH3BS89 294 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 SAP30O75446 220 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 CBLN1P23435 193 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 MBNL3Q9NUK0 354 aaKnown RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 NUP210Q8TEM1 1887 aaPredicted RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 TRAV8-6A0A0B4J262 113 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 MBD3L4A6NDZ8 208 aaPredicted RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 MBD3L3A6NE82 208 aaPredicted RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 MBD3L5A6NJ08 208 aaPredicted RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 TSPAN13O95857 204 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 ZNF585BQ52M93 769 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 MBD3L2Q8NHZ7 208 aaPredicted RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 KLHDC3Q9BQ90 382 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 PSG8Q9UQ74 426 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 IGHV1-8P0DP01 117 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 SRSF8Q9BRL6 282 aaKnown RBP7□□□□□ -1.29
CTNND1-225ENST00000530094 SLC25A2Q9BXI2 301 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 SLC25A15Q9Y619 301 aa7□□□□□ -1.29
CTNND1-225ENST00000530094 ZNF98A6NK75 572 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 ADARB2-AS1A8MUL3 147 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 TMEM86BQ8N661 226 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 RNF182Q8N6D2 247 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 BEX4Q9NWD9 120 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-225ENST00000530094 ATP5L2Q7Z4Y8 100 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 CUL9Q8IWT3 2517 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 TYMSP04818 313 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 CD33P20138 364 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 ZNF415Q09FC8 603 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 TMEM155Q4W5P6 130 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 IMMP2LQ96T52 175 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 GRIFINA4D1Z8 144 aa6.99□□□□□ -1.29
CTNND1-225ENST00000530094 LYPD3O95274 346 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms