RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 RNASEH2CQ8TDP1 164 aaKnown RBP14.25□□□□□ -0.13
CAPN1-211ENST00000527739 MAP6D1Q9H9H5 199 aa14.25□□□□□ -0.13
CAPN1-211ENST00000527739 CACFD1Q9UGQ2 172 aa14.25□□□□□ -0.13
CAPN1-211ENST00000527739 A0A0B4J2A0 478 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 A0A0J9YWU9 116 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 SLC25A4P12235 298 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 NPY1RP25929 384 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 CCR6P51684 374 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 KLF9Q13886 244 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-211ENST00000527739 SMCO1Q147U7 214 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 ETFRF1Q6IPR1 90 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 PRSS54Q6PEW0 395 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 NOXA1Q86UR1 476 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 OR1S1Q8NH92 325 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 Q8WTZ3 238 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 SHPKQ9UHJ6 478 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 TP53TG1Q9Y2A0 90 aa14.24□□□□□ -0.13
CAPN1-211ENST00000527739 JTBO76095 146 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 IGKV1-17P01599 117 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 OR10J1P30954 320 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 SUPT4H1P63272 117 aaKnown RBP14.23□□□□□ -0.13
CAPN1-211ENST00000527739 SRPXP78539 464 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 PMS2P11Q13670 270 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 LYG2Q86SG7 212 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 STXBP6Q8NFX7 210 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 OR1S2Q8NGQ3 325 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 DTD1Q8TEA8 209 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 NPIPB3Q92617 1050 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 RNF183Q96D59 192 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 ACY3Q96HD9 319 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 CSTL1Q9H114 145 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 RBKSQ9H477 322 aa14.23□□□□□ -0.13
CAPN1-211ENST00000527739 CXorf65A6NEN9 183 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 MPTX1A8MV57 137 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 IGLC1P0CG04 106 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 VAMP1P23763 118 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 DEFB131AP59861 70 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 TNFRSF9Q07011 255 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 NMSQ5H8A3 153 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 LEMD1Q68G75 181 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 GRAMD2BQ96HH9 432 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 V9GYH0 126 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 ALMS1Q8TCU4 4167 aa14.22□□□□□ -0.13
CAPN1-211ENST00000527739 IFNA4P05014 189 aa14.21□□□□□ -0.13
CAPN1-211ENST00000527739 CRYBB3P26998 211 aa14.21□□□□□ -0.13
CAPN1-211ENST00000527739 P2RY1P47900 373 aa14.21□□□□□ -0.13
CAPN1-211ENST00000527739 RBMS2Q15434 407 aaKnown RBP14.21□□□□□ -0.13
CAPN1-211ENST00000527739 TMEM170AQ8WVE7 144 aa14.21□□□□□ -0.13
CAPN1-211ENST00000527739 TRIM63Q969Q1 353 aa14.21□□□□□ -0.13
CAPN1-211ENST00000527739 HSPB7Q9UBY9 170 aa14.21□□□□□ -0.13
CAPN1-211ENST00000527739 U3KQ87 197 aa14.21□□□□□ -0.13
CAPN1-211ENST00000527739 INPP1P49441 399 aa14.2□□□□□ -0.14
CAPN1-211ENST00000527739 FAM24BQ8N5W8 94 aa14.2□□□□□ -0.14
CAPN1-211ENST00000527739 IL4P05112 153 aa14.19□□□□□ -0.14
CAPN1-211ENST00000527739 HNRNPCP07910 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
CAPN1-211ENST00000527739 YPEL3P61236 119 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-211ENST00000527739 ZNF79Q15937 498 aa14.19□□□□□ -0.14
CAPN1-211ENST00000527739 TMEM128Q5BJH2 165 aa14.19□□□□□ -0.14
CAPN1-211ENST00000527739 SPANXN2Q5MJ10 180 aa14.19□□□□□ -0.14
CAPN1-211ENST00000527739 CCDC190Q86UF4 302 aa14.19□□□□□ -0.14
CAPN1-211ENST00000527739 PAIP2BQ9ULR5 123 aaKnown RBP14.19□□□□□ -0.14
CAPN1-211ENST00000527739 TRAV2A0A0B4J234 112 aa14.18□□□□□ -0.14
CAPN1-211ENST00000527739 PIGBOS1A0A0B4J2F0 54 aa14.18□□□□□ -0.14
CAPN1-211ENST00000527739 RD3LP0DJH9 198 aa14.18□□□□□ -0.14
CAPN1-211ENST00000527739 EIF2B2P49770 351 aaKnown RBP14.18□□□□□ -0.14
CAPN1-211ENST00000527739 EWSR1Q01844 656 aaKnown RBP eCLIP14.18□□□□□ -0.14
CAPN1-211ENST00000527739 STHQ8IWL8 128 aa14.18□□□□□ -0.14
CAPN1-211ENST00000527739 RARRES2Q99969 163 aa14.18□□□□□ -0.14
CAPN1-211ENST00000527739 SLC25A21Q9BQT8 299 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-211ENST00000527739 CA1P00915 261 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-211ENST00000527739 ZNF688P0C7X2 276 aa14.17□□□□□ -0.14
CAPN1-211ENST00000527739 IAPPP10997 89 aa14.17□□□□□ -0.14
CAPN1-211ENST00000527739 DHRS2Q13268 280 aa14.17□□□□□ -0.14
CAPN1-211ENST00000527739 TMEM217Q8N7C4 229 aa14.17□□□□□ -0.14
CAPN1-211ENST00000527739 HELTA6NFD8 242 aa14.16□□□□□ -0.14
CAPN1-211ENST00000527739 K7EQG2 157 aa14.16□□□□□ -0.14
CAPN1-211ENST00000527739 RBM38Q9H0Z9 239 aaKnown RBP14.16□□□□□ -0.14
CAPN1-211ENST00000527739 LINC00854A0A1B0GVQ3 168 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 DUXBA0A1W2PPF3 345 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 ZFP92A6NM28 416 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 SFT2D2O95562 160 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 TOMM40O96008 361 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 HOXB5P09067 269 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 PPP1R1AQ13522 171 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 USF2Q15853 346 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-211ENST00000527739 TRIQKQ629K1 86 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 C16orf54Q6UWD8 224 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 CENPSQ8N2Z9 138 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 OR11H2Q8NH07 326 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 GATAD1Q8WUU5 269 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 SLC35E1Q96K37 410 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 PBDC1Q9BVG4 233 aa14.15□□□□□ -0.14
CAPN1-211ENST00000527739 KNCNA6PVL3 124 aa14.14□□□□□ -0.15
CAPN1-211ENST00000527739 PSG1P11464 419 aa14.14□□□□□ -0.15
CAPN1-211ENST00000527739 AP2S1P53680 142 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-211ENST00000527739 ATP5IP56385 69 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-211ENST00000527739 RAB11AP62491 216 aa14.14□□□□□ -0.15
CAPN1-211ENST00000527739 OR51G1Q8NGK1 321 aa14.14□□□□□ -0.15
CAPN1-211ENST00000527739 DEDD2Q8WXF8 326 aa14.14□□□□□ -0.15
CAPN1-211ENST00000527739 MAGT1Q9H0U3 335 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms