RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636		M0R233	179 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	SLC17A3	O00476	420 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	BUB3	O43684	328 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	NDUFB6	O95139	128 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	BGLAP	P02818	100 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	MAS1	P04201	325 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	ARG1	P05089	322 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	CRYGD	P07320	174 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	FAM106CP	P0CH98	169 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	NFYA	P23511	347 aa	Predicted RBP	3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	CD200	P41217	278 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	REG1B	P48304	166 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	BID	P55957	195 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	TAS2R19	P59542	299 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	TAS2R20	P59543	309 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	SEC61A1	P61619	476 aa	Known RBP	3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	ZNF616	Q08AN1	781 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	PLCXD2	Q0VAA5	305 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	SMAGP	Q0VAQ4	97 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	ZNF154	Q13106	437 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	TMEM187	Q14656	261 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	CD226	Q15762	336 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	ZNF726P1	Q15940	193 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	NNAT	Q16517	81 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	IZUMO4	Q1ZYL8	232 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	PLPPR5	Q32ZL2	321 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	TPTE2P1	Q5T6R2	138 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	TMEM244	Q5VVB8	128 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	C1orf140	Q5VVS0	124 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	OTP	Q5XKR4	325 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR4S1	Q8NGB4	309 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR4P4	Q8NGL7	312 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR1L8	Q8NGR8	309 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR2T35	Q8NGX2	323 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR4S2	Q8NH73	311 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	OTOS	Q8NHW6	89 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	RDH5	Q92781	318 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	TMEM106A	Q96A25	262 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	MUCL1	Q96DR8	90 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	DNAJA3	Q96EY1	480 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	TSPAN32	Q96QS1	320 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	CMSS1	Q9BQ75	279 aa	Known RBP	3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	SLC25A21	Q9BQT8	299 aa	Predicted RBP	3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	GINS3	Q9BRX5	216 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	C20orf85	Q9H1P6	137 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	MTFP1	Q9UDX5	166 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR5V1	Q9UGF6	321 aa		3.97	□□□□□ -1.77
PABPC1-223	ENST00000523636	FSIP2	Q5CZC0	6907 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	IGHV4-28	A0A0C4DH34	117 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	FAM240A	A0A1B0GVK7	77 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	hDV102S1	A0JD36	115 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	NCBP2L	A6PVI3	153 aa	Known RBP	3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	HMSD	A8MTL9	139 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	SLC17A2	O00624	439 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	TNFRSF13B	O14836	293 aa	Predicted RBP	3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	DEDD	O75618	318 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	OR2A4	O95047	310 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	PMS2P2	O95744	297 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	IGHM	P01871	453 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	OR8U8	P0C7N1	319 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	AKAIN1	P0CW23	69 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	RBMY1A1	P0DJD3	496 aa	Known RBP	3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	RAB5A	P20339	215 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	CDK2	P24941	298 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	BTC	P35070	178 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	GUCA1A	P43080	201 aa	Predicted RBP	3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	SUB1	P53999	127 aa	Known RBP eCLIP	3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	RHOB	P62745	196 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	ZNF117	Q03924	483 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	GAGE5	Q13069	117 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	GAGE6	Q13070	117 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	MEST	Q5EB52	335 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	TMEM78	Q5T7P6	136 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	LAMTOR1	Q6IAA8	161 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	OR10K2	Q6IF99	312 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	BRD3OS	Q6XYD6	125 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636		Q6ZVH6	145 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	MARCH3	Q86UD3	253 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	LRRTM1	Q86UE6	522 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	GAPT	Q8N292	157 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	TMEM229B	Q8NBD8	167 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	OR11H7	Q8NGC8	314 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	OR51S1	Q8NGJ8	323 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	OR5D14	Q8NGL3	314 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	OR10D3	Q8NH80	312 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	MFSD8	Q8NHS3	518 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	GPR119	Q8TDV5	335 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	FAM3D	Q96BQ1	224 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	OR2A7	Q96R45	310 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	ATG5	Q9H1Y0	275 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	IDI2-AS1	Q9NZ38	188 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	DOK5	Q9P104	306 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	RNF7	Q9UBF6	113 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	RAB22A	Q9UL26	194 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	ZFP30	Q9Y2G7	519 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	OR2W1	Q9Y3N9	320 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636		R4GMQ9	66 aa		3.96	□□□□□ -1.78
PABPC1-223	ENST00000523636	TNXB	P22105	4242 aa		3.95	□□□□□ -1.78

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