RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 FAM25AB3EWG3 89 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 FAM25CB3EWG5 89 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 FAM25GB3EWG6 89 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 TBPP20226 339 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 OPRK1P41145 380 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 PIGPP57054 158 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 KRTAP10-2P60368 255 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 SPATA12Q7Z6I5 190 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 ZFAND1Q8TCF1 268 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 ST8SIA2Q92186 375 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 TMEM230Q96A57 120 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 CLN5O75503 358 aa7.93□□□□□ -1.14
RNF4-218ENST00000513284 TMEM50AO95807 157 aa7.93□□□□□ -1.14
RNF4-218ENST00000513284 IGKV1-39P01597 117 aa7.93□□□□□ -1.14
RNF4-218ENST00000513284 IGHV3-48P01763 117 aa7.93□□□□□ -1.14
RNF4-218ENST00000513284 IGKV1D-39P04432 117 aa7.93□□□□□ -1.14
RNF4-218ENST00000513284 SPP1P10451 314 aa7.93□□□□□ -1.14
RNF4-218ENST00000513284 ZNF182P17025 639 aaPredicted RBP7.93□□□□□ -1.14
RNF4-218ENST00000513284 ALDH3B2P48448 385 aa7.93□□□□□ -1.14
RNF4-218ENST00000513284 AP2S1P53680 142 aaPredicted RBP7.93□□□□□ -1.14
RNF4-218ENST00000513284 GPR107Q5VW38 600 aa7.93□□□□□ -1.14
RNF4-218ENST00000513284 CACFD1Q9UGQ2 172 aa7.93□□□□□ -1.14
RNF4-218ENST00000513284 C3orf85A0A1B0GTC6 90 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 HELTA6NFD8 242 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 NPY1RP25929 384 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 RPL5P46777 297 aaKnown RBP7.92□□□□□ -1.14
RNF4-218ENST00000513284 SPINK9Q5DT21 86 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 NOXA1Q86UR1 476 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 FAM219AQ8IW50 185 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 C6orf223Q8N319 242 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 STXBP6Q8NFX7 210 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 OR4X1Q8NH49 305 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 FAM210BQ96KR6 192 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 ABHD1Q96SE0 405 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 ZFAND3Q9H8U3 227 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 KLK11Q9UBX7 282 aa7.92□□□□□ -1.14
RNF4-218ENST00000513284 FLG2Q5D862 2391 aaPredicted RBP7.92□□□□□ -1.14
RNF4-218ENST00000513284 IGHV3-66A0A0C4DH42 116 aa7.91□□□□□ -1.14
RNF4-218ENST00000513284 M0QYG6 137 aa7.91□□□□□ -1.14
RNF4-218ENST00000513284 RNASE2P10153 161 aaKnown RBP7.91□□□□□ -1.14
RNF4-218ENST00000513284 HTR2BP41595 481 aa7.91□□□□□ -1.14
RNF4-218ENST00000513284 P2RY1P47900 373 aa7.91□□□□□ -1.14
RNF4-218ENST00000513284 TAS2R19P59542 299 aa7.91□□□□□ -1.14
RNF4-218ENST00000513284 NUTF2P61970 127 aaKnown RBP7.91□□□□□ -1.14
RNF4-218ENST00000513284 ETFRF1Q6IPR1 90 aa7.91□□□□□ -1.14
RNF4-218ENST00000513284 LHFPL1Q86WI0 220 aa7.91□□□□□ -1.14
RNF4-218ENST00000513284 OR1S2Q8NGQ3 325 aa7.91□□□□□ -1.14
RNF4-218ENST00000513284 Q8WTZ3 238 aa7.91□□□□□ -1.14
RNF4-218ENST00000513284 MRPS26Q9BYN8 205 aaKnown RBP7.91□□□□□ -1.14
RNF4-218ENST00000513284 C14orf166Q9Y224 244 aaKnown RBP7.91□□□□□ -1.14
RNF4-218ENST00000513284 A0A0B4J293 547 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 NBDYA0A0U1RRE5 68 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 K7EQG2 157 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 GSTZ1O43708 216 aaPredicted RBP7.9□□□□□ -1.14
RNF4-218ENST00000513284 IGKV1-5P01602 117 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 SLC25A4P12235 298 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 PI3P19957 117 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 UCP1P25874 307 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 CRYBB3P26998 211 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 ETV6P41212 452 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 PPP5CP53041 499 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 XGP55808 180 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 SPCS3P61009 180 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 SCGB2B2Q4G0G5 96 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 OR52E5Q8NH55 327 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 OR52I2Q8NH67 350 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 TP53RKQ96S44 253 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 C1QTNF4Q9BXJ3 329 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 MIXL1Q9H2W2 232 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 EXTL2Q9UBQ6 330 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 MTFP1Q9UDX5 166 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 PFDN2Q9UHV9 154 aa7.9□□□□□ -1.14
RNF4-218ENST00000513284 A0A1B0GU03 582 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 CTDSP2O14595 271 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 RAB3DO95716 219 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 CD3DP04234 171 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 HNRNPCP07910 306 aaKnown RBP eCLIP7.89□□□□□ -1.154e-7■□□□□ 10.8
RNF4-218ENST00000513284 ZNF688P0C7X2 276 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 NUP62P37198 522 aaPredicted RBP7.89□□□□□ -1.15
RNF4-218ENST00000513284 SNRPD3P62318 126 aaKnown RBP7.89□□□□□ -1.15
RNF4-218ENST00000513284 MRPS10P82664 201 aaKnown RBP7.89□□□□□ -1.15
RNF4-218ENST00000513284 DHODHQ02127 395 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 SSBP1Q04837 148 aaKnown RBP7.89□□□□□ -1.15
RNF4-218ENST00000513284 MEF2DQ14814 521 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 SPCS2Q15005 226 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 IZUMO4Q1ZYL8 232 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 RNASE12Q5GAN4 147 aaKnown RBP7.89□□□□□ -1.15
RNF4-218ENST00000513284 ACTL10Q5JWF8 245 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 GPR141Q7Z602 305 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 LYPD1Q8N2G4 141 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 TMEM229BQ8NBD8 167 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 ZNRF2Q8NHG8 242 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 TERB2Q8NHR7 220 aa7.89□□□□□ -1.15
RNF4-218ENST00000513284 RNASEH2CQ8TDP1 164 aaKnown RBP7.89□□□□□ -1.15
RNF4-218ENST00000513284 HEYLQ9NQ87 328 aaPredicted RBP7.89□□□□□ -1.15
RNF4-218ENST00000513284 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.89□□□□□ -1.15
RNF4-218ENST00000513284 TEX13DA0A0J9YY54 714 aaPredicted RBP7.88□□□□□ -1.15
RNF4-218ENST00000513284 DISC1C4P0D8 188 aa7.88□□□□□ -1.15
RNF4-218ENST00000513284 P0C879 139 aa7.88□□□□□ -1.15
RNF4-218ENST00000513284 SPART-AS1P0CW21 52 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms