RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 MUC7Q8TAX7 377 aa8.63□□□□□ -1.03
SH3RF1-205ENST00000511421 FAM110AQ9BQ89 295 aa8.63□□□□□ -1.03
SH3RF1-205ENST00000511421 C7orf50Q9BRJ6 194 aaKnown RBP8.63□□□□□ -1.03
SH3RF1-205ENST00000511421 TMED3Q9Y3Q3 217 aa8.63□□□□□ -1.03
SH3RF1-205ENST00000511421 LOC102724200A0A096LPH7 203 aaPredicted RBP8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 C9orf170A2RU37 121 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 CRYBB3P26998 211 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 OR10J1P30954 320 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 GGNBP1Q5YKI7 109 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 ETFRF1Q6IPR1 90 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 TCF24Q7RTU0 167 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 NPIPB3Q92617 1050 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 GGTLC1Q9BX51 225 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 IGHV3-66A0A0C4DH42 116 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 FAM90A26D6RGX4 464 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 PLA2G10O15496 165 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 SCGB2A1O75556 95 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 HOXB5P09067 269 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 NPPCP23582 126 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 BMI1P35226 326 aa8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 ATP5IP56385 69 aaPredicted RBP8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 YPEL3P61236 119 aaPredicted RBP8.62□□□□□ -1.03
SH3RF1-205ENST00000511421 IGKV3-7A0A075B6H7 116 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 CENPXA8MT69 81 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 DFFBO76075 338 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 CD5P06127 495 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 OR4E1P0C645 316 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 IAPPP10997 89 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 TFPI2P48307 235 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 DHRS2Q13268 280 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 GBGT1Q8N5D6 347 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 ACY3Q96HD9 319 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 FAM210AQ96ND0 272 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 METTL26Q96S19 204 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 U3KQE9 123 aa8.61□□□□□ -1.03
SH3RF1-205ENST00000511421 IFNA4P05014 189 aa8.6□□□□□ -1.03
SH3RF1-205ENST00000511421 ANXA7P20073 488 aaKnown RBP8.6□□□□□ -1.03
SH3RF1-205ENST00000511421 GPX4P36969 197 aaPredicted RBP8.6□□□□□ -1.03
SH3RF1-205ENST00000511421 LYG2Q86SG7 212 aa8.6□□□□□ -1.03
SH3RF1-205ENST00000511421 Q8WTZ3 238 aa8.6□□□□□ -1.03
SH3RF1-205ENST00000511421 TMEM231Q9H6L2 316 aa8.6□□□□□ -1.03
SH3RF1-205ENST00000511421 A0A1W2PS18 150 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 MPTX1A8MV57 137 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 SYNGR2O43760 224 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 MED6O75586 246 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 ADAP1O75689 374 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 PAFAH1B2P68402 229 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 GAMTQ14353 236 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 ZNF124Q15973 351 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 CASC10Q5T4H9 136 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 APRG1Q8IVJ8 170 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 MAGT1Q9H0U3 335 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 MS4A6AQ9H2W1 248 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 IGKV1D-37A0A075B6S9 117 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 TRAV2A0A0B4J234 112 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 A6NHS1 94 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 LYRM1O43325 122 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 TOMM40O96008 361 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 P2RY1P47900 373 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 CMC4P56277 68 aaPredicted RBP8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 ID3Q02535 119 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 USF2Q15853 346 aaPredicted RBP8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 CNPY1Q3B7I2 92 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 LINC00299Q6ZSB3 139 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 WFDC3Q8IUB2 231 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 COQ8AQ8NI60 647 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 CIB3Q96Q77 187 aaPredicted RBP8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 OVOL2Q9BRP0 275 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 MAP6D1Q9H9H5 199 aa8.59□□□□□ -1.03
SH3RF1-205ENST00000511421 STARD9Q9P2P6 4700 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 KIR2DL5BA0A0G2JN68 375 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 KIR2DL5BA0A0G2JPC4 375 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 PRSS46E5RG02 174 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 WRBO00258 174 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 IL4P05112 153 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 HNRNPCP07910 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 RD3LP0DJH9 198 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 PSG1P11464 419 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 LYL1P12980 280 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 RAB11AP62491 216 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 C4orf46Q504U0 113 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 KIR2DL5AQ8N109 375 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 FAM24BQ8N5W8 94 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 KIR2DL5BQ8NHK3 375 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 SLC35E1Q96K37 410 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 CCDC32Q9BV29 185 aa8.58□□□□□ -1.04
SH3RF1-205ENST00000511421 DYNC2H1Q8NCM8 4307 aaKnown RBP8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 DNASE2O00115 360 aaPredicted RBP8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 RPL35AP18077 110 aaKnown RBP8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 APOC4P55056 127 aa8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 RPL11P62913 178 aaKnown RBP8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 C16orf54Q6UWD8 224 aa8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 OR4D5Q8NGN0 318 aa8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 MITD1Q8WV92 249 aa8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 GLMPQ8WWB7 406 aa8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 C20orf85Q9H1P6 137 aa8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 CSMD3Q7Z407 3707 aa8.57□□□□□ -1.04
SH3RF1-205ENST00000511421 ZFP92A6NM28 416 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 K7EQG2 157 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 UBE2CO00762 179 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms