RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 REG1AP05451 166 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 FOSL1P15407 271 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 HNF1AP20823 631 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 CRYBB3P26998 211 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 BRS3P32247 399 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 IER3P46695 156 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 REG1BP48304 166 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 SUB1P53999 127 aaKnown RBP eCLIP8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 DIAPH2-AS1Q14236 149 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 TMEM183BQ1AE95 376 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 FAM71F2Q6NXP2 309 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 TEX43Q6ZNM6 134 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 ZNF833PQ6ZTB9 187 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 VSTM2AQ8TAG5 236 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 SLC25A33Q9BSK2 321 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 COMMD5Q9GZQ3 224 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 AKAP6Q13023 2319 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 NUPR1O60356 82 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 OR7C2O60412 319 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 RNF224P0DH78 156 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 RNASE2P10153 161 aaKnown RBP8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 RAB4AP20338 218 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 USF1P22415 310 aaPredicted RBP8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 DLX6P56179 175 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 PRB3Q04118 309 aaPredicted RBP8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 TMEM155Q4W5P6 130 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 C11orf71Q6IPW1 123 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 ZNF841Q6ZN19 808 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 SIGLECL1Q8N7X8 197 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 OR1L4Q8NGR5 311 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 SAMD10Q9BYL1 202 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 CBLN4Q9NTU7 201 aa8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 MAP1AP78559 2803 aaPredicted RBP8.89□□□□□ -0.99
SH3RF1-203ENST00000508685 GRIFINA4D1Z8 144 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 TCAPO15273 167 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 SERF1AO75920 110 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 ACTL6BO94805 426 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 TMEM177Q53S58 311 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 OR8I2Q8N0Y5 310 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 C11orf42Q8N5U0 333 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 C8orf31Q8N9H6 132 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 MIEN1Q9BRT3 115 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 MRPL20Q9BYC9 149 aaKnown RBP8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 DNAJC4Q9NNZ3 241 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 NAT8BQ9UHF3 227 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 TP53TG3Q9ULZ0 132 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 SMIM27A0A1W2PRY6 76 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 SRRM4A7MD48 611 aaKnown RBP8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 C19orf84I3L1E1 186 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 AMY1AP04745 511 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 SNRPCP09234 159 aaKnown RBP8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 IGHV1-8P0DP01 117 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 MYOD1P15172 320 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 TOMM20LQ6UXN7 152 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 FAM231DQ6ZW35 169 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 TGIF2LXQ8IUE1 241 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 OR10X1Q8NGY0 326 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 NEU1Q99519 415 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 HSPB9Q9BQS6 159 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 RAB1BQ9H0U4 201 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 NDUFA4L2Q9NRX3 87 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 ZNF586Q9NXT0 402 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 CDC42EP3Q9UKI2 254 aa8.88□□□□□ -0.99
SH3RF1-203ENST00000508685 IZUMO1RA6ND01 250 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 SAA1P0DJI8 122 aaPredicted RBP8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 BPIFB3P59826 476 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 RPL8P62917 257 aaKnown RBP8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 SUMO1P63165 101 aaKnown RBP8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 IBA57Q5T440 356 aaKnown RBP8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 TPTE2P1Q5T6R2 138 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 Q6ZWC4 215 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 STXBP6Q8NFX7 210 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 OR5AN1Q8NGI8 311 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 TMEM167AQ8TBQ9 72 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 ZNF503Q96F45 646 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 SNHG12Q9BXW3 62 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 CELSR2Q9HCU4 2923 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 GPX1P07203 203 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 OR5I1Q13606 314 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 TMEM136Q6ZRR5 245 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 PDPNQ86YL7 162 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 OR4B1Q8NGF8 309 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 OR4C13Q8NGP0 309 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 WIPF2Q8TF74 440 aaPredicted RBP8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 TMEM186Q96B77 213 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 FLYWCH2Q96CP2 140 aaKnown RBP8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 SMIM12Q96EX1 92 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 IGF2BP2-AS1Q96M15 143 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 VAMP8Q9BV40 100 aa8.87□□□□□ -0.99
SH3RF1-203ENST00000508685 TNCP24821 2201 aa8.86□□□□□ -0.99
SH3RF1-203ENST00000508685 IGKV1OR2-108A0A075B7D4 117 aa8.86□□□□□ -0.99
SH3RF1-203ENST00000508685 H0YJW9 148 aa8.86□□□□□ -0.99
SH3RF1-203ENST00000508685 CDKN1AP38936 164 aa8.86□□□□□ -0.99
SH3RF1-203ENST00000508685 LINC00310P59036 64 aa8.86□□□□□ -0.99
SH3RF1-203ENST00000508685 SRSF1Q07955 248 aaKnown RBP eCLIP8.86□□□□□ -0.99
SH3RF1-203ENST00000508685 ETFRF1Q6IPR1 90 aa8.86□□□□□ -0.99
SH3RF1-203ENST00000508685 LINC00311Q8N616 119 aa8.86□□□□□ -0.99
SH3RF1-203ENST00000508685 HARBI1Q96MB7 349 aa8.86□□□□□ -0.99
SH3RF1-203ENST00000508685 ZNF331Q9NQX6 463 aaPredicted RBP8.86□□□□□ -0.99
SH3RF1-203ENST00000508685 A0A1B0GUS0 222 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms