RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 CMC4P56277 68 aaPredicted RBP5.24□□□□□ -1.57
TOP3A-207ENST00000493648 RAB11AP62491 216 aa5.24□□□□□ -1.57
TOP3A-207ENST00000493648 PAFAH1B2P68402 229 aa5.24□□□□□ -1.57
TOP3A-207ENST00000493648 GGNBP1Q5YKI7 109 aa5.24□□□□□ -1.57
TOP3A-207ENST00000493648 LYG2Q86SG7 212 aa5.24□□□□□ -1.57
TOP3A-207ENST00000493648 DEFB125Q8N687 156 aa5.24□□□□□ -1.57
TOP3A-207ENST00000493648 NARS2Q96I59 477 aaKnown RBP5.24□□□□□ -1.57
TOP3A-207ENST00000493648 WWC2-AS2Q96NR7 200 aa5.24□□□□□ -1.57
TOP3A-207ENST00000493648 CIB3Q96Q77 187 aaPredicted RBP5.24□□□□□ -1.57
TOP3A-207ENST00000493648 SPAG8Q99932 426 aaPredicted RBP5.24□□□□□ -1.57
TOP3A-207ENST00000493648 TMEM231Q9H6L2 316 aa5.24□□□□□ -1.57
TOP3A-207ENST00000493648 SRD5A3Q9H8P0 318 aa5.24□□□□□ -1.57
TOP3A-207ENST00000493648 PUS1Q9Y606 427 aaKnown RBP eCLIP5.24□□□□□ -1.57
TOP3A-207ENST00000493648 IGHV3-49A0A0A0MS15 119 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 OR4C46A6NHA9 309 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 SYNGR2O43760 224 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 TCRBP04435 133 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 ANXA7P20073 488 aaKnown RBP5.23□□□□□ -1.57
TOP3A-207ENST00000493648 OR10J1P30954 320 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 BTCP35070 178 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 GPX4P36969 197 aaPredicted RBP5.23□□□□□ -1.57
TOP3A-207ENST00000493648 RND2P52198 227 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 YPEL3P61236 119 aaPredicted RBP5.23□□□□□ -1.57
TOP3A-207ENST00000493648 DHRS2Q13268 280 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 ZNF846Q147U1 533 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 HAGHQ16775 308 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 TIGITQ495A1 244 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 MZT2BQ6NZ67 158 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 PRSS54Q6PEW0 395 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 OR1S2Q8NGQ3 325 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 TMEM170AQ8WVE7 144 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 NPIPB3Q92617 1050 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 ACY3Q96HD9 319 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 RCHY1Q96PM5 261 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 METTL26Q96S19 204 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 RNF2Q99496 336 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 WDR12Q9GZL7 423 aaKnown RBP5.23□□□□□ -1.57
TOP3A-207ENST00000493648 ZFAND3Q9H8U3 227 aa5.23□□□□□ -1.57
TOP3A-207ENST00000493648 MRPL36Q9P0J6 103 aaKnown RBP5.23□□□□□ -1.57
TOP3A-207ENST00000493648 PAIP2BQ9ULR5 123 aaKnown RBP5.23□□□□□ -1.57
TOP3A-207ENST00000493648 IGHV3OR16-13A0A075B7E8 117 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 IGHV3-74A0A0B4J1X5 117 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 FAM240BA0A1B0GVZ2 78 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 WRBO00258 174 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 ADAP1O75689 374 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 IGKV1-17P01599 117 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 FABP1P07148 127 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 H2AFB2P0C5Z0 115 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 IGLC1P0CG04 106 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 RD3LP0DJH9 198 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 IAPPP10997 89 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 NKX2-1P43699 371 aaPredicted RBP5.22□□□□□ -1.57
TOP3A-207ENST00000493648 RPL11P62913 178 aaKnown RBP5.22□□□□□ -1.57
TOP3A-207ENST00000493648 LINC00322Q6ZN03 302 aaPredicted RBP5.22□□□□□ -1.57
TOP3A-207ENST00000493648 TCF24Q7RTU0 167 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 MITD1Q8WV92 249 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 GRAMD2BQ96HH9 432 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 ZNF414Q96IQ9 312 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 SLC35E1Q96K37 410 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 SPATA25Q9BR10 227 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 TM2D3Q9BRN9 247 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 MAGT1Q9H0U3 335 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 C20orf85Q9H1P6 137 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 VSIRQ9H7M9 311 aa5.22□□□□□ -1.57
TOP3A-207ENST00000493648 IGKV3-7A0A075B6H7 116 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 TRAV6A0A075B6T7 132 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 LOC102724200A0A096LPH7 203 aaPredicted RBP5.21□□□□□ -1.58
TOP3A-207ENST00000493648 IGHV3-66A0A0C4DH42 116 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 RBMY1BA6NDE4 496 aaKnown RBP5.21□□□□□ -1.58
TOP3A-207ENST00000493648 RBMY1EA6NEQ0 496 aaKnown RBP5.21□□□□□ -1.58
TOP3A-207ENST00000493648 ZFP92A6NM28 416 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 DNASE2O00115 360 aaPredicted RBP5.21□□□□□ -1.58
TOP3A-207ENST00000493648 DFFBO76075 338 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 TOMM40O96008 361 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 APOHP02749 345 aaPredicted RBP5.21□□□□□ -1.58
TOP3A-207ENST00000493648 HNRNPCP07910 306 aaKnown RBP eCLIP5.21□□□□□ -1.58
TOP3A-207ENST00000493648 RBMY1DP0C7P1 496 aaKnown RBP5.21□□□□□ -1.58
TOP3A-207ENST00000493648 CRYBB3P26998 211 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 TFPI2P48307 235 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 EIF2B2P49770 351 aaKnown RBP5.21□□□□□ -1.58
TOP3A-207ENST00000493648 AP2S1P53680 142 aaPredicted RBP5.21□□□□□ -1.58
TOP3A-207ENST00000493648 ID3Q02535 119 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 GAMTQ14353 236 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 SPANXN5Q5MJ07 72 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 FAM90A2PQ658T7 463 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 GBGT1Q8N5D6 347 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 ST8SIA2Q92186 375 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 FAM110AQ9BQ89 295 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 GGTLC1Q9BX51 225 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 WFDC10AQ9H1F0 79 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 NUDT15Q9NV35 164 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 PSENENQ9NZ42 101 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 GSKIPQ9P0R6 139 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 UBQLN2Q9UHD9 624 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 PFDN2Q9UHV9 154 aa5.21□□□□□ -1.58
TOP3A-207ENST00000493648 STRAPQ9Y3F4 350 aaKnown RBP5.21□□□□□ -1.58
TOP3A-207ENST00000493648 COL7A1Q02388 2944 aa5.2□□□□□ -1.58
TOP3A-207ENST00000493648 TRAV2A0A0B4J234 112 aa5.2□□□□□ -1.58
TOP3A-207ENST00000493648 HELTA6NFD8 242 aa5.2□□□□□ -1.58
TOP3A-207ENST00000493648 MPTX1A8MV57 137 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms