RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 NPPCP23582 126 aa15.18■□□□□ 0.02
HDAC4-209ENST00000487617 PAFAH1B2P68402 229 aa15.18■□□□□ 0.02
HDAC4-209ENST00000487617 LILRB2Q8N423 598 aa15.18■□□□□ 0.02
HDAC4-209ENST00000487617 LRTM2Q8N967 370 aa15.18■□□□□ 0.02
HDAC4-209ENST00000487617 METTL26Q96S19 204 aa15.18■□□□□ 0.02
HDAC4-209ENST00000487617 TMEM231Q9H6L2 316 aa15.18■□□□□ 0.02
HDAC4-209ENST00000487617 LINC00854A0A1B0GVQ3 168 aa15.17■□□□□ 0.02
HDAC4-209ENST00000487617 IGLC1P0CG04 106 aa15.17■□□□□ 0.02
HDAC4-209ENST00000487617 OR10J1P30954 320 aa15.17■□□□□ 0.02
HDAC4-209ENST00000487617 ZFAND6Q6FIF0 208 aa15.17■□□□□ 0.02
HDAC4-209ENST00000487617 ACY3Q96HD9 319 aa15.17■□□□□ 0.02
HDAC4-209ENST00000487617 SDHCQ99643 169 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-209ENST00000487617 A0A1W2PS18 150 aa15.16■□□□□ 0.02
HDAC4-209ENST00000487617 PITX3O75364 302 aa15.16■□□□□ 0.02
HDAC4-209ENST00000487617 DFFBO76075 338 aa15.16■□□□□ 0.02
HDAC4-209ENST00000487617 APOC4P55056 127 aa15.16■□□□□ 0.02
HDAC4-209ENST00000487617 CMC4P56277 68 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-209ENST00000487617 RPL11P62913 178 aaKnown RBP15.16■□□□□ 0.02
HDAC4-209ENST00000487617 WFDC3Q8IUB2 231 aa15.16■□□□□ 0.02
HDAC4-209ENST00000487617 APRG1Q8IVJ8 170 aa15.16■□□□□ 0.02
HDAC4-209ENST00000487617 Q8WTZ3 238 aa15.16■□□□□ 0.02
HDAC4-209ENST00000487617 NPIPB3Q92617 1050 aa15.16■□□□□ 0.02
HDAC4-209ENST00000487617 TMED3Q9Y3Q3 217 aa15.16■□□□□ 0.02
HDAC4-209ENST00000487617 DNASE2O00115 360 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-209ENST00000487617 NDUFB6O95139 128 aa15.15■□□□□ 0.02
HDAC4-209ENST00000487617 IFNA4P05014 189 aa15.15■□□□□ 0.02
HDAC4-209ENST00000487617 SLC25A6P12236 298 aa15.15■□□□□ 0.02
HDAC4-209ENST00000487617 CRYBB3P26998 211 aa15.15■□□□□ 0.02
HDAC4-209ENST00000487617 UBE2MP61081 183 aaKnown RBP15.15■□□□□ 0.02
HDAC4-209ENST00000487617 YPEL3P61236 119 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-209ENST00000487617 NARS2Q96I59 477 aaKnown RBP15.15■□□□□ 0.02
HDAC4-209ENST00000487617 HOXB5P09067 269 aa15.14■□□□□ 0.01
HDAC4-209ENST00000487617 RPL35AP18077 110 aaKnown RBP15.14■□□□□ 0.01
HDAC4-209ENST00000487617 ATP5IP56385 69 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-209ENST00000487617 OVOL2Q9BRP0 275 aa15.14■□□□□ 0.01
HDAC4-209ENST00000487617 MS4A6AQ9H2W1 248 aa15.14■□□□□ 0.01
HDAC4-209ENST00000487617 NBEAL2Q6ZNJ1 2754 aa15.14■□□□□ 0.01
HDAC4-209ENST00000487617 CENPXA8MT69 81 aa15.13■□□□□ 0.01
HDAC4-209ENST00000487617 IAPPP10997 89 aa15.13■□□□□ 0.01
HDAC4-209ENST00000487617 MAP6D1Q9H9H5 199 aa15.13■□□□□ 0.01
HDAC4-209ENST00000487617 FLVCR2Q9UPI3 526 aa15.13■□□□□ 0.01
HDAC4-209ENST00000487617 KIR2DL5BA0A0G2JN68 375 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 KIR2DL5BA0A0G2JPC4 375 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 C9orf170A2RU37 121 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 FAM90A26D6RGX4 464 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 UBE2CO00762 179 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 MED6O75586 246 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 IL7P13232 177 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 P2RY1P47900 373 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 ZNF124Q15973 351 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 GGNBP1Q5YKI7 109 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 KIR2DL5AQ8N109 375 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 STPG3Q8N7X2 389 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 KIR2DL5BQ8NHK3 375 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 GRAMD2BQ96HH9 432 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 C7orf50Q9BRJ6 194 aaKnown RBP15.12■□□□□ 0.01
HDAC4-209ENST00000487617 RABAC1Q9UI14 185 aa15.12■□□□□ 0.01
HDAC4-209ENST00000487617 TRAV2A0A0B4J234 112 aa15.11■□□□□ 0.01
HDAC4-209ENST00000487617 IL4P05112 153 aa15.11■□□□□ 0.01
HDAC4-209ENST00000487617 RD3LP0DJH9 198 aa15.11■□□□□ 0.01
HDAC4-209ENST00000487617 Q6ZWC4 215 aa15.11■□□□□ 0.01
HDAC4-209ENST00000487617 SLC35E1Q96K37 410 aa15.11■□□□□ 0.01
HDAC4-209ENST00000487617 MAGT1Q9H0U3 335 aa15.11■□□□□ 0.01
HDAC4-209ENST00000487617 PAIP2BQ9ULR5 123 aaKnown RBP15.11■□□□□ 0.01
HDAC4-209ENST00000487617 SPRY2O43597 315 aa15.1■□□□□ 0.01
HDAC4-209ENST00000487617 TOMM40O96008 361 aa15.1■□□□□ 0.01
HDAC4-209ENST00000487617 HNRNPCP07910 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
HDAC4-209ENST00000487617 BTCP35070 178 aa15.1■□□□□ 0.01
HDAC4-209ENST00000487617 GPX4P36969 197 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-209ENST00000487617 RAB11AP62491 216 aa15.1■□□□□ 0.01
HDAC4-209ENST00000487617 DEFB135Q30KP9 77 aa15.1■□□□□ 0.01
HDAC4-209ENST00000487617 STXBP6Q8NFX7 210 aa15.1■□□□□ 0.01
HDAC4-209ENST00000487617 COQ8AQ8NI60 647 aa15.1■□□□□ 0.01
HDAC4-209ENST00000487617 CIB3Q96Q77 187 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-209ENST00000487617 TP53TG1Q9Y2A0 90 aa15.1■□□□□ 0.01
HDAC4-209ENST00000487617 U3KQE9 123 aa15.1■□□□□ 0.01
HDAC4-209ENST00000487617 KMT2CQ8NEZ4 4911 aaKnown RBP15.1■□□□□ 0.01
HDAC4-209ENST00000487617 SYNGR2O43760 224 aa15.09■□□□□ 0.01
HDAC4-209ENST00000487617 OR4E1P0C645 316 aa15.09■□□□□ 0.01
HDAC4-209ENST00000487617 ANXA7P20073 488 aaKnown RBP15.09■□□□□ 0.01
HDAC4-209ENST00000487617 DEFB131AP59861 70 aa15.09■□□□□ 0.01
HDAC4-209ENST00000487617 DHRS2Q13268 280 aa15.09■□□□□ 0.01
HDAC4-209ENST00000487617 GAMTQ14353 236 aa15.09■□□□□ 0.01
HDAC4-209ENST00000487617 USF2Q15853 346 aaPredicted RBP15.09■□□□□ 0.01
HDAC4-209ENST00000487617 IL17DQ8TAD2 202 aa15.09■□□□□ 0.01
HDAC4-209ENST00000487617 ZFP92A6NM28 416 aa15.08■□□□□ 0
HDAC4-209ENST00000487617 WRBO00258 174 aa15.08■□□□□ 0
HDAC4-209ENST00000487617 ADAP1O75689 374 aa15.08■□□□□ 0
HDAC4-209ENST00000487617 PSG1P11464 419 aa15.08■□□□□ 0
HDAC4-209ENST00000487617 EIF2B2P49770 351 aaKnown RBP15.08■□□□□ 0
HDAC4-209ENST00000487617 RPP30P78346 268 aaKnown RBP15.08■□□□□ 0
HDAC4-209ENST00000487617 C4orf46Q504U0 113 aa15.08■□□□□ 0
HDAC4-209ENST00000487617 LYG2Q86SG7 212 aa15.08■□□□□ 0
HDAC4-209ENST00000487617 FAM24BQ8N5W8 94 aa15.08■□□□□ 0
HDAC4-209ENST00000487617 LEMD1Q68G75 181 aa15.07■□□□□ 0
HDAC4-209ENST00000487617 C16orf54Q6UWD8 224 aa15.07■□□□□ 0
HDAC4-209ENST00000487617 OR51G1Q8NGK1 321 aa15.07■□□□□ 0
HDAC4-209ENST00000487617 CSTL1Q9H114 145 aa15.07■□□□□ 0
HDAC4-209ENST00000487617 HELTA6NFD8 242 aa15.06■□□□□ 0
HDAC4-209ENST00000487617 K7EQG2 157 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms