RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 E5RGE8 158 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 H0YIZ8 118 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 K7EPK0 472 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 SSX5O60225 188 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 NDUFS6O75380 124 aaKnown RBP4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 LY6G6CO95867 125 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 ADCYAP1P18509 176 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 GZMHP20718 246 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 KCNJ3P48549 501 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 CAMLGP49069 296 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 GAMTQ14353 236 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 AARDQ4LEZ3 155 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 DPPA3Q6W0C5 159 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 SLC25A48Q6ZT89 311 aaKnown RBP4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 CBLN2Q8IUK8 224 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 OR52M1Q8NGK5 317 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 OR4A4PQ8NGN8 299 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 OR5H2Q8NGV7 314 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 NEK7Q8TDX7 302 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 FLYWCH2Q96CP2 140 aaKnown RBP4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 RNF183Q96D59 192 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 RAB3CQ96E17 227 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 MS4A10Q96PG2 267 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 GPER1Q99527 375 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 ARV1Q9H2C2 271 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 CYTL1Q9NRR1 136 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 GNG12Q9UBI6 72 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 NSG2Q9Y328 171 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 FBXO7Q9Y3I1 522 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 NBR2O15453 112 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 MED6O75586 246 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 EIF3GO75821 320 aaKnown RBP eCLIP4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 OR7C1O76099 320 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 IGLV1-51P01701 117 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 HLA-DRB1P01911 266 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 HSPB1P04792 205 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 GLAP06280 429 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 HIST1H1DP16402 221 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 AKR1C4P17516 323 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 RAB5AP20339 215 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 S100A2P29034 98 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 HRH1P35367 487 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 ZNF137PP52743 207 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 TPPP2P59282 170 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 QRFPP83859 136 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 PAX5Q02548 391 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 IL15RAQ13261 267 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 C5orf64Q2M2E5 130 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 LRRC37A5PQ49AS3 106 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 CT45A1Q5HYN5 189 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 LHFPL1Q86WI0 220 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 STX12Q86Y82 276 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 LRTM2Q8N967 370 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 C8orf31Q8N9H6 132 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 ZNF439Q8NDP4 499 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 OR51A2Q8NGJ7 313 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 OR1L1Q8NH94 360 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 CT45A3Q8NHU0 189 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 TMED6Q8WW62 240 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 HIST1H2BAQ96A08 127 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 BSCL2Q96G97 398 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 RNF126Q9BV68 326 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 MRPL20Q9BYC9 149 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 SLC35B3Q9H1N7 401 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 GSN-AS1Q9NRJ2 163 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 SLC35D1Q9NTN3 355 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 TAS2R4Q9NYW5 299 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 CACFD1Q9UGQ2 172 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 FOXA2Q9Y261 457 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 ST3GAL6Q9Y274 331 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 KCNIP3Q9Y2W7 256 aa4.89□□□□□ -1.63
TMEM39A-209ENST00000486235 C13orf42A0A1B0GVH6 325 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 DUXBA0A1W2PPF3 345 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 TMEM235A6NFC5 223 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 GEMIN2O14893 280 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 ST8SIA3O43173 380 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 DEDDO75618 318 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 BRI3O95415 125 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 HBE1P02100 147 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 CTSDP07339 412 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 PTHLHP12272 177 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 SERPINA2P20848 420 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 RPL12P30050 165 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 ZNF93P35789 620 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 SNCAP37840 140 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 P2RY1P47900 373 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 NPBWR1P48145 328 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 CX3CL1P78423 397 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 ZNF266Q14584 549 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 GNMTQ14749 295 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 Q3ZCU0 254 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 GTSCR1Q86UQ5 136 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 OR10G4Q8NGN3 311 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 RNASE11Q8TAA1 199 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 GALNT14Q96FL9 552 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 SEC22AQ96IW7 307 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 BTF3L4Q96K17 158 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 TXN2Q99757 166 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 SPIN2AQ99865 258 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms