RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CNTFRP26992 372 aa5.1□□□□□ -1.59
PRPF4B-205ENST00000480058 PI4KAP42356 2102 aa5.1□□□□□ -1.59
PRPF4B-205ENST00000480058 MINOS1Q5TGZ0 78 aa5.1□□□□□ -1.59
PRPF4B-205ENST00000480058 MINOS1-NBL1R4GNA1 71 aa5.1□□□□□ -1.59
PRPF4B-205ENST00000480058 K7EMI3 77 aa5.1□□□□□ -1.59
PRPF4B-205ENST00000480058 APOMO95445 188 aa5.1□□□□□ -1.59
PRPF4B-205ENST00000480058 ZFP36L1Q07352 338 aaKnown RBP5.1□□□□□ -1.59
PRPF4B-205ENST00000480058 GAGE12BA1L429 117 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 TSPAN13O95857 204 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 GFRA1P56159 465 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 ZNF56Q15929 161 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 MPV17L2Q567V2 206 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 RNASE7Q9H1E1 156 aaKnown RBP5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 QSER1Q2KHR3 1735 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 SAA2-SAA4A0A096LPE2 208 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 A0A0A6YYD4 124 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 RRN3P1Q2M238 152 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 GPHA2Q96T91 129 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 MRPL20Q9BYC9 149 aaKnown RBP5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 SPG11Q96JI7 2443 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 SAA2P0DJI9 122 aaPredicted RBP5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 TMEM86BQ8N661 226 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 VWCEQ96DN2 955 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 LYZL4Q96KX0 146 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 LINC00477Q96M19 166 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 STRCQ7RTU9 1775 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 IGHV1-24A0A0C4DH33 117 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 NDUFB8O95169 186 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 LHX2P50458 406 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 PAX2Q02962 417 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 SPEM2Q0P670 501 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 FBXL15Q9H469 300 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 KIF13BQ9NQT8 1826 aa5.09□□□□□ -1.59
PRPF4B-205ENST00000480058 A0A0G2JMM0 328 aa5.09□□□□□ -1.6
PRPF4B-205ENST00000480058 A0A1W2PPB8 328 aa5.09□□□□□ -1.6
PRPF4B-205ENST00000480058 KIR3DP1A8MWS1 328 aa5.09□□□□□ -1.6
PRPF4B-205ENST00000480058 VCYO14598 125 aa5.09□□□□□ -1.6
PRPF4B-205ENST00000480058 VKORC1Q9BQB6 163 aa5.09□□□□□ -1.6
PRPF4B-205ENST00000480058 IGHV3-72A0A0B4J1Y9 119 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 ZC2HC1BQ5TFG8 222 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 TMEM256Q8N2U0 113 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 PLSCR4Q9NRQ2 329 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 C2CD3Q4AC94 2353 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 ZNF815PA8K554 130 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 CCL21O00585 134 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 SMAD7O15105 426 aaKnown RBP5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 LEPP41159 167 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 OCIAD2Q56VL3 154 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 DTX1Q86Y01 620 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 FAM216BQ8N7L0 139 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 C18orf15Q96N68 181 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 M0R381 172 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 UBE2L6O14933 153 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 SNHG12Q9BXW3 62 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 C15orf62A8K5M9 175 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 PDLIM4P50479 330 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 LGALS9BQ3B8N2 356 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 GFI1BQ5VTD9 330 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 CDCP2Q5VXM1 449 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 LGALS9CQ6DKI2 356 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 VOPP1Q96AW1 172 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 HILPDAQ9Y5L2 63 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 CELA2AP08217 269 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 RFPL3SP0C7P2 107 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 SRSF2Q01130 221 aaKnown RBP5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 SRSF6Q13247 344 aaKnown RBP5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 LAGE3Q14657 143 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 TEX43Q6ZNM6 134 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 M0R2P5 195 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 NPFFO15130 113 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 ESDP10768 282 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 CSRP1P21291 193 aaKnown RBP5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 ZNF138P52744 262 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 SSBP2P81877 361 aaPredicted RBP5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 C18orf32Q8TCD1 76 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 PNRC2Q9NPJ4 139 aaKnown RBP5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 SLC25A15Q9Y619 301 aa5.08□□□□□ -1.6
PRPF4B-205ENST00000480058 GGTLC3B5MD39 225 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 LINC01545Q5VT33 79 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 ST6GALNAC3Q8NDV1 305 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 PPDPFLQ8WWR9 84 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 DNAJC30Q96LL9 226 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 DPH3P1Q9H4G8 78 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 BDP1A6H8Y1 2624 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 LOC101059948A0A1B0GTJ6 334 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 F8W1H4 67 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 RHODO00212 210 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 TRGV3P03979 118 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 GUSBP1Q15486 140 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 Q5PR19 223 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 WIPF2Q8TF74 440 aaPredicted RBP5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 H7C2G1 150 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 EFNA2O43921 213 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 KLK15Q9H2R5 256 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 MYO9AB2RTY4 2548 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 TUBGCP6Q96RT7 1819 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 IGHV3-21A0A0B4J1V1 117 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 KIR2DL5BA0A0G2JN68 375 aa5.07□□□□□ -1.6
PRPF4B-205ENST00000480058 KIR2DL5BA0A0G2JPC4 375 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms