RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ZNF660Q6AZW8 331 aaPredicted RBP2.73□□□□□ -1.97
UBR3-209ENST00000477461 HCP5Q6MZN7 132 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 FAM71F2Q6NXP2 309 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 BRD3OSQ6XYD6 125 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 ZNF818PQ6ZRF7 136 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 ZNF833PQ6ZTB9 187 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 LHFPL4Q7Z7J7 247 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 TCTEX1D1Q8N7M0 179 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 DUSP18Q8NEJ0 188 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 OR4P4Q8NGL7 312 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 OR51H1Q8NH63 302 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 RNASE11Q8TAA1 199 aaKnown RBP2.73□□□□□ -1.97
UBR3-209ENST00000477461 CD300LFQ8TDQ1 290 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 CAPSLQ8WWF8 208 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 RTN4IP1Q8WWV3 396 aaPredicted RBP2.73□□□□□ -1.97
UBR3-209ENST00000477461 MALSU1Q96EH3 234 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 AGMATQ9BSE5 352 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 MRPL20Q9BYC9 149 aaKnown RBP2.73□□□□□ -1.97
UBR3-209ENST00000477461 C20orf85Q9H1P6 137 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 ZNF702PQ9H963 129 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 BEX1Q9HBH7 125 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 SLC2A9Q9NRM0 540 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 SLC35D1Q9NTN3 355 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 NUDT15Q9NV35 164 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 SDHAF2Q9NX18 166 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 ZNRD1Q9P1U0 126 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 HILPDAQ9Y5L2 63 aa2.73□□□□□ -1.97
UBR3-209ENST00000477461 IGLV8-61A0A075B6I0 122 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 IGHV3-72A0A0B4J1Y9 119 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 C3orf85A0A1B0GTC6 90 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 CRYM-AS1A6NIL9 109 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 H0Y980 276 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 SSNA1O43805 119 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 CREBL2O60519 120 aaPredicted RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 PGLYRP1O75594 196 aaPredicted RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 UTP20O75691 2785 aaKnown RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 SERF1AO75920 110 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 SFT2D2O95562 160 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 CRYZL1O95825 349 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 HPRT1P00492 218 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 HRASP01112 189 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 IL5P05113 134 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 SERPINE2P07093 398 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 OR5AC1P0C628 307 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 OR4E1P0C645 316 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 CT45A6P0DMU7 189 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 CT45A5P0DMU8 189 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 CT45A7P0DMV0 189 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 RPA2P15927 270 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 F2RP25116 425 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 CD1BP29016 333 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 LPAR6P43657 344 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 ZNF137PP52743 207 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 AKR1C2P52895 323 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 RND3P61587 244 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 PPP1R1AQ13522 171 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 DIAPH2-AS1Q14236 149 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 PLGLAQ15195 96 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 SLC9A3R2Q15599 337 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 LRRC75BQ2VPJ9 315 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 VMA21Q3ZAQ7 101 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 OR2B11Q5JQS5 317 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 KLF17Q5JT82 389 aaPredicted RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 C9orf129Q5T035 196 aaKnown RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 LYG2Q86SG7 212 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 PDPNQ86YL7 162 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 ZNF695Q8IW36 515 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 LGI3Q8N145 548 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 DRAXINQ8NBI3 349 aaPredicted RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 OR4C13Q8NGP0 309 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 OR2T10Q8NGZ9 312 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 OR4S2Q8NH73 311 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 COQ8AQ8NI60 647 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 ZNF418Q8TF45 676 aaPredicted RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 CASTOR1Q8WTX7 329 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 C22orf15Q8WYQ4 148 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 FLYWCH2Q96CP2 140 aaKnown RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 SPENQ96T58 3664 aaKnown RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 TSNAXQ99598 290 aaKnown RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 PHB2Q99623 299 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 SMR3AQ99954 134 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 NABP2Q9BQ15 211 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 ZNF251Q9BRH9 671 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 RTBDNQ9BSG5 229 aaPredicted RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 ALX4Q9H161 411 aaPredicted RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 NAA60Q9H7X0 242 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 PITPNC1Q9UKF7 332 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 FLVCR2Q9UPI3 526 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 WASHC3Q9Y3C0 194 aa2.72□□□□□ -1.97
UBR3-209ENST00000477461 FLNBO75369 2602 aaKnown RBP2.72□□□□□ -1.97
UBR3-209ENST00000477461 CENPEQ02224 2701 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 HIVEP2P31629 2446 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 RELNP78509 3460 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 NAV3Q8IVL0 2385 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 C9orf170A2RU37 121 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 RNF222A6NCQ9 220 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 NCBP2LA6PVI3 153 aaKnown RBP2.71□□□□□ -1.98
UBR3-209ENST00000477461 SNRPGP15A8MWD9 76 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 H0YJW9 148 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 LY6LH3BQJ8 138 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms