RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 FLNBO75369 2602 aaKnown RBP22.53■■□□□ 1.2
VEGFA-211ENST00000476772 CLN5O75503 358 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 IGLC1P0CG04 106 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 SRD5A1P18405 259 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 SCGB2A2Q13296 93 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 FAM122CQ6P4D5 195 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 ZNF702PQ9H963 129 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 C21orf62Q9NYP8 219 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 ZNF580Q9UK33 172 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 A0A1B0GV50 99 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 EIF3GO75821 320 aaKnown RBP eCLIP22.52■■□□□ 1.2
VEGFA-211ENST00000476772 FOSL1P15407 271 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 MFAP4P55083 255 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 SLC25A22Q9H936 323 aa22.52■■□□□ 1.2
VEGFA-211ENST00000476772 BAHCC1Q9P281 2608 aa22.51■■□□□ 1.19
VEGFA-211ENST00000476772 IGHV3-23P01764 117 aa22.51■■□□□ 1.19
VEGFA-211ENST00000476772 C15orf32Q32M92 178 aa22.51■■□□□ 1.19
VEGFA-211ENST00000476772 Q71RC1 249 aaPredicted RBP22.51■■□□□ 1.19
VEGFA-211ENST00000476772 NECAP1Q8NC96 275 aa22.51■■□□□ 1.19
VEGFA-211ENST00000476772 ESM1Q9NQ30 184 aa22.51■■□□□ 1.19
VEGFA-211ENST00000476772 CDC42EP3Q9UKI2 254 aa22.51■■□□□ 1.19
VEGFA-211ENST00000476772 F8W735 103 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-211ENST00000476772 VN1R17PQ8TDU5 208 aa22.5■■□□□ 1.19
VEGFA-211ENST00000476772 SFT2D1Q8WV19 159 aa22.5■■□□□ 1.19
VEGFA-211ENST00000476772 NPBWR1P48145 328 aa22.49■■□□□ 1.19
VEGFA-211ENST00000476772 SELENOTP62341 195 aa22.49■■□□□ 1.19
VEGFA-211ENST00000476772 CFHR3Q02985 330 aa22.49■■□□□ 1.19
VEGFA-211ENST00000476772 TIGITQ495A1 244 aa22.49■■□□□ 1.19
VEGFA-211ENST00000476772 SPSB3Q6PJ21 355 aa22.49■■□□□ 1.19
VEGFA-211ENST00000476772 ACTR3CQ9C0K3 210 aaPredicted RBP22.49■■□□□ 1.19
VEGFA-211ENST00000476772 Q56UQ5 140 aa22.49■■□□□ 1.19
VEGFA-211ENST00000476772 LCN15Q6UWW0 184 aa22.49■■□□□ 1.19
VEGFA-211ENST00000476772 CITED4Q96RK1 184 aa22.49■■□□□ 1.19
VEGFA-211ENST00000476772 CTXND1A0A1B0GTU2 59 aa22.48■■□□□ 1.19
VEGFA-211ENST00000476772 IGKV1-17P01599 117 aa22.48■■□□□ 1.19
VEGFA-211ENST00000476772 CDC34P49427 236 aaPredicted RBP22.48■■□□□ 1.19
VEGFA-211ENST00000476772 MBD3L1Q8WWY6 194 aa22.48■■□□□ 1.19
VEGFA-211ENST00000476772 MARC2Q969Z3 335 aa22.48■■□□□ 1.19
VEGFA-211ENST00000476772 SEC14L6B5MCN3 397 aa22.47■■□□□ 1.19
VEGFA-211ENST00000476772 HMGB3O15347 200 aaKnown RBP22.47■■□□□ 1.19
VEGFA-211ENST00000476772 GNG7O60262 68 aa22.47■■□□□ 1.19
VEGFA-211ENST00000476772 TRGV3P03979 118 aa22.47■■□□□ 1.19
VEGFA-211ENST00000476772 RAB24Q969Q5 203 aa22.47■■□□□ 1.19
VEGFA-211ENST00000476772 MAP1LC3B2A6NCE7 125 aa22.46■■□□□ 1.19
VEGFA-211ENST00000476772 H3BUA1 57 aa22.46■■□□□ 1.19
VEGFA-211ENST00000476772 IL34Q6ZMJ4 242 aa22.46■■□□□ 1.19
VEGFA-211ENST00000476772 ZNF502Q8TBZ5 544 aa22.46■■□□□ 1.19
VEGFA-211ENST00000476772 MAP1LC3BQ9GZQ8 125 aa22.46■■□□□ 1.19
VEGFA-211ENST00000476772 HIVEP2P31629 2446 aa22.46■■□□□ 1.19
VEGFA-211ENST00000476772 BRI3O95415 125 aa22.46■■□□□ 1.19
VEGFA-211ENST00000476772 FGF8P55075 233 aaPredicted RBP22.46■■□□□ 1.19
VEGFA-211ENST00000476772 CCL20P78556 96 aa22.46■■□□□ 1.19
VEGFA-211ENST00000476772 A0A1W2PPV4 95 aa22.45■■□□□ 1.18
VEGFA-211ENST00000476772 FAM223BA6NKX1 122 aa22.45■■□□□ 1.18
VEGFA-211ENST00000476772 IGLV1-40P01703 118 aa22.45■■□□□ 1.18
VEGFA-211ENST00000476772 HBE1P02100 147 aa22.45■■□□□ 1.18
VEGFA-211ENST00000476772 FCGR2BP31994 310 aaPredicted RBP22.45■■□□□ 1.18
VEGFA-211ENST00000476772 TPPP2P59282 170 aa22.45■■□□□ 1.18
VEGFA-211ENST00000476772 FAM223AQ8IWN6 122 aa22.45■■□□□ 1.18
VEGFA-211ENST00000476772 TXN2Q99757 166 aa22.45■■□□□ 1.18
VEGFA-211ENST00000476772 TRAV30A0A087WSZ9 112 aa22.44■■□□□ 1.18
VEGFA-211ENST00000476772 TRAV1-1A0A0B4J248 108 aa22.44■■□□□ 1.18
VEGFA-211ENST00000476772 PSMB11A5LHX3 300 aa22.44■■□□□ 1.18
VEGFA-211ENST00000476772 OR2T8A6NH00 312 aa22.44■■□□□ 1.18
VEGFA-211ENST00000476772 ZNF329Q86UD4 541 aa22.44■■□□□ 1.18
VEGFA-211ENST00000476772 Q8N2B8 174 aa22.44■■□□□ 1.18
VEGFA-211ENST00000476772 SEPSECSQ9HD40 501 aaKnown RBP22.44■■□□□ 1.18
VEGFA-211ENST00000476772 DOK5Q9P104 306 aa22.44■■□□□ 1.18
VEGFA-211ENST00000476772 FAM181BA6NEQ2 426 aa22.43■■□□□ 1.18
VEGFA-211ENST00000476772 NUDT19A8MXV4 375 aa22.43■■□□□ 1.18
VEGFA-211ENST00000476772 INAFM1C9JVW0 142 aa22.43■■□□□ 1.18
VEGFA-211ENST00000476772 PF4V1P10720 104 aa22.43■■□□□ 1.18
VEGFA-211ENST00000476772 PSG1P11464 419 aa22.43■■□□□ 1.18
VEGFA-211ENST00000476772 ATP5G2Q06055 141 aa22.43■■□□□ 1.18
VEGFA-211ENST00000476772 SPATA31B1PQ5VZV4 182 aa22.43■■□□□ 1.18
VEGFA-211ENST00000476772 TMEM37Q8WXS4 190 aa22.43■■□□□ 1.18
VEGFA-211ENST00000476772 EEF1AKMT3Q96AZ1 226 aa22.43■■□□□ 1.18
VEGFA-211ENST00000476772 KLK15Q9H2R5 256 aa22.43■■□□□ 1.18
VEGFA-211ENST00000476772 CLDN34H7C241 214 aa22.42■■□□□ 1.18
VEGFA-211ENST00000476772 RHOBP62745 196 aa22.42■■□□□ 1.18
VEGFA-211ENST00000476772 ZNF418Q8TF45 676 aaPredicted RBP22.42■■□□□ 1.18
VEGFA-211ENST00000476772 CCDC140Q96MF4 163 aa22.42■■□□□ 1.18
VEGFA-211ENST00000476772 FAM78BQ5VT40 261 aa22.42■■□□□ 1.18
VEGFA-211ENST00000476772 RAB19A4D1S5 217 aa22.41■■□□□ 1.18
VEGFA-211ENST00000476772 GPR183P32249 361 aa22.41■■□□□ 1.18
VEGFA-211ENST00000476772 C10orf99Q6UWK7 81 aa22.41■■□□□ 1.18
VEGFA-211ENST00000476772 LCNL1Q6ZST4 164 aa22.41■■□□□ 1.18
VEGFA-211ENST00000476772 COMMD1Q8N668 190 aa22.41■■□□□ 1.18
VEGFA-211ENST00000476772 TRBV7-1A0A0A6YYK4 115 aa22.4■■□□□ 1.18
VEGFA-211ENST00000476772 COX7A2P2O60397 106 aa22.4■■□□□ 1.18
VEGFA-211ENST00000476772 TOMM40O96008 361 aa22.4■■□□□ 1.18
VEGFA-211ENST00000476772 IGHG4P01861 327 aa22.4■■□□□ 1.18
VEGFA-211ENST00000476772 FABP1P07148 127 aa22.4■■□□□ 1.18
VEGFA-211ENST00000476772 OR5G3P0C626 314 aa22.4■■□□□ 1.18
VEGFA-211ENST00000476772 RD3LP0DJH9 198 aa22.4■■□□□ 1.18
VEGFA-211ENST00000476772 PATE2Q6UY27 113 aa22.4■■□□□ 1.18
VEGFA-211ENST00000476772 EIF4E3Q8N5X7 224 aaKnown RBP22.4■■□□□ 1.18
VEGFA-211ENST00000476772 OR1L4Q8NGR5 311 aa22.4■■□□□ 1.18
VEGFA-211ENST00000476772 C19orf24Q9BVV8 132 aa22.4■■□□□ 1.18
VEGFA-211ENST00000476772 DNAJC4Q9NNZ3 241 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms