RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 PEF1Q9UBV8 284 aaKnown RBP9.69□□□□□ -0.86
TRAPPC12-217ENST00000473348 IGHV4OR15-8A0A075B7B6 117 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 A0A087WW49 117 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 A0A0D9SG52 128 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 BOLA2-SMG1P6H3BVE0 249 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 I3L521 148 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 TGOLN2O43493 480 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 SCGB2A1O75556 95 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 DFFBO76075 338 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 CLEC3BP05452 202 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 IGLC1P0CG04 106 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 OR10J1P30954 320 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 ARL3P36405 182 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 NKX2-5P52952 324 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 RUNX1Q01196 453 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 TREML4Q6UXN2 200 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 TMEM144Q7Z5S9 345 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 THAP8Q8NA92 274 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 ZNF747Q9BV97 191 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 WFDC1Q9HC57 220 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 NPVFQ9HCQ7 196 aa9.68□□□□□ -0.86
TRAPPC12-217ENST00000473348 IGKV1D-37A0A075B6S9 117 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 IGKV1OR2-108A0A075B7D4 117 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 ZFP92A6NM28 416 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 BMPR1BO00238 502 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 NUPL2O15504 423 aaKnown RBP9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 CTSGP08311 255 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 FGF7P21781 194 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 LGALSLQ3ZCW2 172 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 TIGITQ495A1 244 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 SPSB3Q6PJ21 355 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 TEPPQ6URK8 271 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 C9orf62Q8N4C0 152 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 ARPC5LQ9BPX5 153 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 CHRDL1Q9BU40 450 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 ARL6Q9H0F7 186 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 WDR83OSQ9Y284 106 aa9.67□□□□□ -0.86
TRAPPC12-217ENST00000473348 KANTRA0A1W2PQU2 76 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 TAAR5O14804 337 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 BCL2L11O43521 198 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 GGCTO75223 188 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 IFNA5P01569 189 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 IGKV1-17P01599 117 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 HSPB1P04792 205 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 ADMP35318 185 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 ZNF266Q14584 549 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 BTNL8Q6UX41 500 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 TMUB2Q71RG4 321 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 OR11H1Q8NG94 326 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 DPF1Q92782 380 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 DUX3Q96PT4 197 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 TRGV9Q99603 122 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 MDFIQ99750 246 aa9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 LSM4Q9Y4Z0 139 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-217ENST00000473348 IGHV3-35A0A0C4DH35 117 aa9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 HNRNPCP07910 306 aaKnown RBP eCLIP9.65□□□□□ -0.862e-6■■■□□ 15.9
TRAPPC12-217ENST00000473348 ZNF616Q08AN1 781 aa9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 RPEL1Q2QD12 228 aa9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 RPL7L1Q6DKI1 246 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 LAMTOR1Q6IAA8 161 aa9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 SHISA2Q6UWI4 295 aa9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 ZNF600Q6ZNG1 722 aa9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 OR1N2Q8NGR9 330 aa9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 RAX2Q96IS3 184 aa9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 MGST2Q99735 147 aa9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 WDR61Q9GZS3 305 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-217ENST00000473348 BORCS7-ASMTA0A0B4J1R7 106 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 LINC01619G3V211 115 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 CCL24O00175 119 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 AGPAT2O15120 278 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 MPDU1O75352 247 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 OR2C1O95371 312 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 FABP1P07148 127 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 ZP3P21754 424 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 HOXD3P31249 432 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 CAMLGP49069 296 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 SLURP1P55000 103 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 YPEL3P61236 119 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 ZNF90Q03938 601 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 RELQ04864 619 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 RAB31Q13636 194 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 CYP2G1PQ6ZSU1 146 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 SCGB1C1Q8TD33 95 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 GGTLC1Q9BX51 225 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 NPCDR1Q9BY65 106 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 PARD6GQ9BYG4 376 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 CYTL1Q9NRR1 136 aa9.64□□□□□ -0.87
TRAPPC12-217ENST00000473348 TOMM40O96008 361 aa9.63□□□□□ -0.87
TRAPPC12-217ENST00000473348 PSG1P11464 419 aa9.63□□□□□ -0.87
TRAPPC12-217ENST00000473348 FHL3Q13643 280 aa9.63□□□□□ -0.87
TRAPPC12-217ENST00000473348 OPCMLQ14982 345 aa9.63□□□□□ -0.87
TRAPPC12-217ENST00000473348 HSD17B11Q8NBQ5 300 aa9.63□□□□□ -0.87
TRAPPC12-217ENST00000473348 PPP1R14BQ96C90 147 aa9.63□□□□□ -0.87
TRAPPC12-217ENST00000473348 ZNF414Q96IQ9 312 aa9.63□□□□□ -0.87
TRAPPC12-217ENST00000473348 ZNF471Q9BX82 626 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC12-217ENST00000473348 PUS1Q9Y606 427 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRAPPC12-217ENST00000473348 NDUFA4O00483 81 aa9.62□□□□□ -0.87
TRAPPC12-217ENST00000473348 JTBO76095 146 aa9.62□□□□□ -0.87
TRAPPC12-217ENST00000473348 RD3LP0DJH9 198 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms