RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 HS3ST2Q9Y278 367 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 RIMBP3CA6NJZ7 1639 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 RIMBP3BA6NNM3 1639 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 RIMBP3Q9UFD9 1639 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 SCN8AQ9UQD0 1980 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 MYLKQ15746 1914 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 CCDC160A6NGH7 325 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 ZNF736B4DX44 427 aaPredicted RBP0.47□□□□□ -2.33
MDM2-216ENST00000471946 PIRO00625 290 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 SMIM10L2AP0DMW4 78 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 SMIM10L2BP0DMW5 78 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 ZNF25P17030 456 aaPredicted RBP0.47□□□□□ -2.33
MDM2-216ENST00000471946 S100A4P26447 101 aaKnown RBP0.47□□□□□ -2.33
MDM2-216ENST00000471946 MPV17LQ2QL34 196 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 LINC01554Q52M75 96 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 CCDC122Q5T0U0 273 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 SOSTDC1Q6X4U4 206 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 TRAPPC6BQ86SZ2 158 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 SBSPONQ8IVN8 264 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 KRT222Q8N1A0 295 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 C3orf56Q8N813 242 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 LINC00301Q8NCQ3 95 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 OR13D1Q8NGV5 346 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 SLC35A3Q9Y2D2 325 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 NUP210LQ5VU65 1888 aa0.47□□□□□ -2.33
MDM2-216ENST00000471946 TEX261Q6UWH6 196 aa0.46□□□□□ -2.34
MDM2-216ENST00000471946 BORCS5Q969J3 196 aa0.46□□□□□ -2.34
MDM2-216ENST00000471946 DCUN1D1Q96GG9 259 aa0.46□□□□□ -2.34
MDM2-216ENST00000471946 C8orf76Q96K31 380 aa0.46□□□□□ -2.34
MDM2-216ENST00000471946 PARD6GQ9BYG4 376 aaPredicted RBP0.46□□□□□ -2.34
MDM2-216ENST00000471946 U3KQ87 197 aa0.46□□□□□ -2.34
MDM2-216ENST00000471946 V9GYY5 206 aaPredicted RBP0.46□□□□□ -2.34
MDM2-216ENST00000471946 PTPRFP10586 1907 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 CLDN24A6NM45 220 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 M0R036 132 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 RBP1P09455 135 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 OR4E1P0C645 316 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 BRMS1LQ5PSV4 323 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 CLECL1Q8IZS7 167 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 CLDN22Q8N7P3 220 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 C20orf27Q9GZN8 174 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 DCSTAMPQ9H295 470 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 UBAP1Q9NZ09 502 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 EPDR1Q9UM22 224 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 PIK3C2GO75747 1445 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 CITO14578 2027 aa0.45□□□□□ -2.34
MDM2-216ENST00000471946 MYO18AQ92614 2054 aaKnown RBP0.44□□□□□ -2.34
MDM2-216ENST00000471946 CLDN25C9JDP6 229 aa0.44□□□□□ -2.34
MDM2-216ENST00000471946 NCR3O14931 201 aa0.44□□□□□ -2.34
MDM2-216ENST00000471946 CNIH1O95406 144 aa0.44□□□□□ -2.34
MDM2-216ENST00000471946 DNAL4O96015 105 aa0.44□□□□□ -2.34
MDM2-216ENST00000471946 TTRP02766 147 aa0.44□□□□□ -2.34
MDM2-216ENST00000471946 SERPINA6P08185 405 aa0.44□□□□□ -2.34
MDM2-216ENST00000471946 YPEL3P61236 119 aaPredicted RBP0.44□□□□□ -2.34
MDM2-216ENST00000471946 IMPG1Q17R60 797 aa0.44□□□□□ -2.34
MDM2-216ENST00000471946 WFDC5Q8TCV5 224 aa0.44□□□□□ -2.34
MDM2-216ENST00000471946 NHP2Q9NX24 153 aaKnown RBP0.44□□□□□ -2.34
MDM2-216ENST00000471946 VPS29Q9UBQ0 182 aa0.44□□□□□ -2.34
MDM2-216ENST00000471946 FANCMQ8IYD8 2048 aa0.43□□□□□ -2.34
MDM2-216ENST00000471946 MYO3BQ8WXR4 1341 aa0.43□□□□□ -2.34
MDM2-216ENST00000471946 A0A087X0T9 212 aa0.43□□□□□ -2.34
MDM2-216ENST00000471946 C1orf196B1AJZ1 125 aa0.43□□□□□ -2.34
MDM2-216ENST00000471946 TSNQ15631 228 aaKnown RBP0.43□□□□□ -2.34
MDM2-216ENST00000471946 ESRGQ1W209 222 aa0.43□□□□□ -2.34
MDM2-216ENST00000471946 CMSS1Q9BQ75 279 aaKnown RBP0.43□□□□□ -2.34
MDM2-216ENST00000471946 CCDC90BQ9GZT6 254 aa0.43□□□□□ -2.34
MDM2-216ENST00000471946 CYSLTR1Q9Y271 337 aa0.43□□□□□ -2.34
MDM2-216ENST00000471946 NUP98P52948 1817 aa0.43□□□□□ -2.34
MDM2-216ENST00000471946 LYPLA2O95372 231 aa0.42□□□□□ -2.34
MDM2-216ENST00000471946 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
MDM2-216ENST00000471946 ADAT3Q96EY9 351 aaPredicted RBP0.42□□□□□ -2.34
MDM2-216ENST00000471946 HIST1H2BLQ99880 126 aa0.42□□□□□ -2.34
MDM2-216ENST00000471946 TMEM70Q9BUB7 260 aa0.42□□□□□ -2.34
MDM2-216ENST00000471946 ZNF462Q96JM2 2506 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 hADV38S2A0JD32 116 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 C7orf71A4D174 169 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 CASP1P29466 404 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 EFNA4P52798 201 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 C12orf74Q32Q52 190 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 GDPD1Q8N9F7 314 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 OR2T10Q8NGZ9 312 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 TEX47Q8TBZ9 253 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 C4orf3Q8WVX3 66 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 PATE1Q8WXA2 126 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 CCDC42Q96M95 316 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 C6orf62Q9GZU0 229 aaPredicted RBP0.41□□□□□ -2.34
MDM2-216ENST00000471946 C14orf132Q9NPU4 83 aa0.41□□□□□ -2.34
MDM2-216ENST00000471946 UTP11Q9Y3A2 253 aaKnown RBP0.41□□□□□ -2.34
MDM2-216ENST00000471946 NCOA1Q15788 1441 aa0.4□□□□□ -2.34
MDM2-216ENST00000471946 MYO5AQ9Y4I1 1855 aaKnown RBP0.4□□□□□ -2.35
MDM2-216ENST00000471946 CCL25O15444 150 aa0.4□□□□□ -2.35
MDM2-216ENST00000471946 ZNF682O95780 498 aa0.4□□□□□ -2.35
MDM2-216ENST00000471946 OMPP47874 163 aa0.4□□□□□ -2.35
MDM2-216ENST00000471946 DEFA3P59666 94 aa0.4□□□□□ -2.35
MDM2-216ENST00000471946 RHOBP62745 196 aa0.4□□□□□ -2.35
MDM2-216ENST00000471946 FAM74A1Q5RGS3 127 aa0.4□□□□□ -2.35
MDM2-216ENST00000471946 C12orf45Q8N5I9 185 aaPredicted RBP0.4□□□□□ -2.35
MDM2-216ENST00000471946 OR8D4Q8NGM9 314 aa0.4□□□□□ -2.35
MDM2-216ENST00000471946 CT55Q8WUE5 264 aa0.4□□□□□ -2.35
MDM2-216ENST00000471946 BCL2L10Q9HD36 194 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms