RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 COMMD5Q9GZQ3 224 aa11.89□□□□□ -0.51
PRPF38B-204ENST00000467302 PPIAL4AQ9Y536 164 aa11.89□□□□□ -0.51
PRPF38B-204ENST00000467302 SPTA1P02549 2419 aa11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 APOA2P02652 100 aa11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 SSBP2P81877 361 aaPredicted RBP11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 ERHP84090 104 aaKnown RBP11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 ADORA2A-AS1P86434 159 aa11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 MRPL54Q6P161 138 aaKnown RBP11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 MBD6Q96DN6 1003 aa11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 LINC00479Q96M42 142 aa11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 FAM103A1Q9BTL3 118 aaKnown RBP11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 NRN1Q9NPD7 142 aa11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 YLPM1P49750 1951 aaKnown RBP11.88□□□□□ -0.51
PRPF38B-204ENST00000467302 CGB1A6NKQ9 187 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 B9A039 149 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 FSTL3O95633 263 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 SRIP30626 198 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 MEF2CQ06413 473 aaPredicted RBP11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 WIPF2Q8TF74 440 aaPredicted RBP11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 FAM168AQ92567 244 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 GAL3ST2Q9H3Q3 398 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 FNDC4Q9H6D8 234 aaPredicted RBP11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 SMG1Q96Q15 3661 aaKnown RBP11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 ROS1P08922 2347 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 ZNF253O75346 499 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 ZNF324O75467 553 aaPredicted RBP11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 FCN3O75636 299 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 CA1P00915 261 aaPredicted RBP11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 REG1AP05451 166 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 USF1P22415 310 aaPredicted RBP11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 CTRLP40313 264 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 AMTP48728 403 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 KRTDAPP60985 99 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 WT1-ASQ06250 92 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 PATE2Q6UY27 113 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 FAM231DQ6ZW35 169 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 NHLRC2Q8NBF2 726 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 OR4B1Q8NGF8 309 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 SERTAD4Q9NUC0 356 aa11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 AMMECR1Q9Y4X0 333 aaPredicted RBP11.87□□□□□ -0.51
PRPF38B-204ENST00000467302 IGKV1D-37A0A075B6S9 117 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 A0A1W2PN81 502 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 DIRC3C9JPN6 131 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 APCSP02743 223 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 RPLP1P05386 114 aaKnown RBP11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 G0S2P27469 103 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 RASL11AQ6T310 242 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 ZNF329Q86UD4 541 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 OR4A5Q8NH83 315 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 FLYWCH2Q96CP2 140 aaKnown RBP11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 ZNF355PQ9NSJ1 428 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 PLAUP00749 431 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 PYYP10082 97 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 CCL3L1P16619 93 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 GRNP28799 593 aaKnown RBP11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 NIT1Q86X76 327 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 ZNF430Q9H8G1 570 aaPredicted RBP11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 ADGRG4Q8IZF6 3080 aa11.86□□□□□ -0.51
PRPF38B-204ENST00000467302 TCRBV4S1A1TA0A5B7 111 aa11.85□□□□□ -0.51
PRPF38B-204ENST00000467302 COX7A2P2O60397 106 aa11.85□□□□□ -0.51
PRPF38B-204ENST00000467302 SLAQ13239 276 aa11.85□□□□□ -0.51
PRPF38B-204ENST00000467302 C10orf113Q5VZT2 155 aa11.85□□□□□ -0.51
PRPF38B-204ENST00000467302 TMEM200BQ69YZ2 307 aa11.85□□□□□ -0.51
PRPF38B-204ENST00000467302 THAP8Q8NA92 274 aa11.85□□□□□ -0.51
PRPF38B-204ENST00000467302 OR4C13Q8NGP0 309 aa11.85□□□□□ -0.51
PRPF38B-204ENST00000467302 OR1L4Q8NGR5 311 aa11.85□□□□□ -0.51
PRPF38B-204ENST00000467302 NPIPB3Q92617 1050 aa11.85□□□□□ -0.51
PRPF38B-204ENST00000467302 PEX7O00628 323 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 TNFRSF13BO14836 293 aaPredicted RBP11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 IGLV2-23P01705 113 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 ZNF25P17030 456 aaPredicted RBP11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 PMCHP20382 165 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 MYCNOSP40205 109 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 REG1BP48304 166 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 ASPHD1Q5U4P2 390 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 VSTM2AQ8TAG5 236 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 ZNF596Q8TC21 504 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 FXYD5Q96DB9 178 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 SSBP3Q9BWW4 388 aaPredicted RBP11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 ZNF331Q9NQX6 463 aaPredicted RBP11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 MRPL27Q9P0M9 148 aaKnown RBP11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 NDUFB3O43676 98 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 PRRX1P54821 245 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 C10orf55Q5SWW7 151 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 FAM71F2Q6NXP2 309 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 PDPNQ86YL7 162 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 C18orf32Q8TCD1 76 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 GRAMD2BQ96HH9 432 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 C7orf69Q9H7B7 122 aa11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 MRPL36Q9P0J6 103 aaKnown RBP11.84□□□□□ -0.51
PRPF38B-204ENST00000467302 IGHV1-69-2A0A0G2JMI3 117 aa11.83□□□□□ -0.52
PRPF38B-204ENST00000467302 C3orf79P0CE67 100 aa11.83□□□□□ -0.52
PRPF38B-204ENST00000467302 BPIFB3P59826 476 aa11.83□□□□□ -0.52
PRPF38B-204ENST00000467302 LY6DQ14210 128 aa11.83□□□□□ -0.52
PRPF38B-204ENST00000467302 LRRC10Q5BKY1 277 aa11.83□□□□□ -0.52
PRPF38B-204ENST00000467302 GDF5OSQ5U4N7 250 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms