RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 NPIPB3Q92617 1050 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 ACY3Q96HD9 319 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 MBD2Q9UBB5 411 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 IGSF23A1L1A6 192 aa12.24□□□□□ -0.45
GPC1-207ENST00000466624 HBG1P69891 147 aa12.24□□□□□ -0.45
GPC1-207ENST00000466624 HBG2P69892 147 aa12.24□□□□□ -0.45
GPC1-207ENST00000466624 BAXQ07812 192 aa12.24□□□□□ -0.45
GPC1-207ENST00000466624 HAPLN4Q86UW8 402 aa12.24□□□□□ -0.45
GPC1-207ENST00000466624 RCC1LQ96I51 464 aaKnown RBP12.24□□□□□ -0.45
GPC1-207ENST00000466624 MCRIP2Q9BUT9 160 aaKnown RBP12.24□□□□□ -0.45
GPC1-207ENST00000466624 ZC4H2Q9NQZ6 224 aa12.24□□□□□ -0.45
GPC1-207ENST00000466624 CMYA5Q8N3K9 4069 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 A8MWP6 167 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 IGKV1-17P01599 117 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 OR10J1P30954 320 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 S100A11P31949 105 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 SYNJ2BPP57105 145 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 YPEL3P61236 119 aaPredicted RBP12.23□□□□□ -0.45
GPC1-207ENST00000466624 SLC38A11Q08AI6 406 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 ARL16Q0P5N6 197 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 ZNF600Q6ZNG1 722 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 TMEM144Q7Z5S9 345 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 THAP8Q8NA92 274 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 OR9G4Q8NGQ1 327 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 OR2T35Q8NGX2 323 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 TMEM190Q8WZ59 177 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 ZNF414Q96IQ9 312 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 PEMTQ9UBM1 199 aa12.23□□□□□ -0.45
GPC1-207ENST00000466624 CST7O76096 145 aa12.22□□□□□ -0.45
GPC1-207ENST00000466624 ELLP55199 621 aaPredicted RBP12.22□□□□□ -0.45
GPC1-207ENST00000466624 EWSR1Q01844 656 aaKnown RBP eCLIP12.22□□□□□ -0.45
GPC1-207ENST00000466624 ATP6V1FQ16864 119 aa12.22□□□□□ -0.45
GPC1-207ENST00000466624 TRGV9Q99603 122 aa12.22□□□□□ -0.45
GPC1-207ENST00000466624 NPVFQ9HCQ7 196 aa12.22□□□□□ -0.45
GPC1-207ENST00000466624 PKD1L1Q8TDX9 2849 aa12.21□□□□□ -0.45
GPC1-207ENST00000466624 IGKV1D-37A0A075B6S9 117 aa12.21□□□□□ -0.45
GPC1-207ENST00000466624 FABP1P07148 127 aa12.21□□□□□ -0.45
GPC1-207ENST00000466624 AKR1C1Q04828 323 aa12.21□□□□□ -0.45
GPC1-207ENST00000466624 VWC2Q2TAL6 325 aa12.21□□□□□ -0.45
GPC1-207ENST00000466624 TIGITQ495A1 244 aa12.21□□□□□ -0.45
GPC1-207ENST00000466624 ELOVL1Q9BW60 279 aa12.21□□□□□ -0.45
GPC1-207ENST00000466624 GPR61Q9BZJ8 451 aa12.21□□□□□ -0.45
GPC1-207ENST00000466624 SIGLEC8Q9NYZ4 499 aa12.21□□□□□ -0.45
GPC1-207ENST00000466624 UFC1Q9Y3C8 167 aa12.21□□□□□ -0.45
GPC1-207ENST00000466624 IGKV1OR2-108A0A075B7D4 117 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 ZFP92A6NM28 416 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 G3V3Q6 166 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 K7EMT4 169 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 TOMM40O96008 361 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 RPL12P30050 165 aaKnown RBP12.2□□□□□ -0.46
GPC1-207ENST00000466624 INSL3P51460 131 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 NHLH2Q02577 135 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 Q5BKY6 102 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 UNQ9165/PRO28630Q6UXU0 137 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 LILRB2Q8N423 598 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 TMEM217Q8N7C4 229 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 UQCC1Q9NVA1 299 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 HSPB11Q9Y547 144 aa12.2□□□□□ -0.46
GPC1-207ENST00000466624 IGHV3-35A0A0C4DH35 117 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 ZNF320A2RRD8 509 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 SMCO3A2RU48 225 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 WIPF1O43516 503 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 C9orf66Q5T8R8 295 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 TEPPQ6URK8 271 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 IL34Q6ZMJ4 242 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 OR5C1Q8NGR4 320 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 Q8WTZ3 238 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 MARC2Q969Z3 335 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 AQP10Q96PS8 301 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 TMEM147Q9BVK8 224 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 ZFAND3Q9H8U3 227 aa12.19□□□□□ -0.46
GPC1-207ENST00000466624 DAZ1Q9NQZ3 744 aaKnown RBP12.19□□□□□ -0.46
GPC1-207ENST00000466624 LSM4Q9Y4Z0 139 aaKnown RBP12.19□□□□□ -0.46
GPC1-207ENST00000466624 PUS1Q9Y606 427 aaKnown RBP eCLIP12.19□□□□□ -0.46
GPC1-207ENST00000466624 TMEM213A2RRL7 107 aa12.18□□□□□ -0.46
GPC1-207ENST00000466624 SEC14L6B5MCN3 397 aa12.18□□□□□ -0.46
GPC1-207ENST00000466624 CFDP00746 253 aaPredicted RBP12.18□□□□□ -0.46
GPC1-207ENST00000466624 RD3LP0DJH9 198 aa12.18□□□□□ -0.46
GPC1-207ENST00000466624 TOMM20LQ6UXN7 152 aa12.18□□□□□ -0.46
GPC1-207ENST00000466624 GINS3Q9BRX5 216 aa12.18□□□□□ -0.46
GPC1-207ENST00000466624 C2orf70A6NJV1 201 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 YIF1AO95070 293 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 CSN3P07498 182 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 PSG1P11464 419 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 IGLL1P15814 213 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 NUP62P37198 522 aaPredicted RBP12.17□□□□□ -0.46
GPC1-207ENST00000466624 SELENOTP62341 195 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 OR51G1Q8NGK1 321 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 ST6GAL2Q96JF0 529 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 MRPL27Q9P0M9 148 aaKnown RBP12.17□□□□□ -0.46
GPC1-207ENST00000466624 TNFSF18Q9UNG2 199 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 WDR83OSQ9Y284 106 aa12.17□□□□□ -0.46
GPC1-207ENST00000466624 NOTCH3Q9UM47 2321 aa12.16□□□□□ -0.46
GPC1-207ENST00000466624 hCG_2014768A0A024R1R8 64 aa12.16□□□□□ -0.46
GPC1-207ENST00000466624 FXYD6-FXYD2A0A087WZ82 144 aa12.16□□□□□ -0.46
GPC1-207ENST00000466624 SAP30O75446 220 aa12.16□□□□□ -0.46
GPC1-207ENST00000466624 DFFBO76075 338 aa12.16□□□□□ -0.46
GPC1-207ENST00000466624 ZNF90Q03938 601 aa12.16□□□□□ -0.46
GPC1-207ENST00000466624 SAMD5Q5TGI4 173 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms